RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 GNPDA1P46926 289 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 DAPP51397 102 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 HYAL2Q12891 473 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 DUSP4Q13115 394 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 GRB14Q14449 540 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 SF1Q15637 639 aaKnown RBP11.39□□□□□ -0.59
LIMK2-202ENST00000333611 CARD16Q5EG05 197 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 LAMTOR1Q6IAA8 161 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 CCDC190Q86UF4 302 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 RGL4Q8IZJ4 473 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 PPP3R2Q96LZ3 170 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 FBXO44Q9H4M3 255 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 ASB8Q9H765 288 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 PRDM5Q9NQX1 630 aaPredicted RBP11.39□□□□□ -0.59
LIMK2-202ENST00000333611 MS4A12Q9NXJ0 267 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 SLC25A37Q9NYZ2 338 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 LAMA2P24043 3122 aaKnown RBP11.39□□□□□ -0.59
LIMK2-202ENST00000333611 PCDH17O14917 1159 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 B4GALT3O60512 393 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 PRAMEF12O95522 483 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 SRCP12931 536 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 PSMA1P25786 263 aaKnown RBP11.39□□□□□ -0.59
LIMK2-202ENST00000333611 GBX2P52951 348 aaPredicted RBP11.39□□□□□ -0.59
LIMK2-202ENST00000333611 LARS2Q15031 903 aaKnown RBP11.39□□□□□ -0.59
LIMK2-202ENST00000333611 C10orf62Q5T681 223 aaPredicted RBP11.39□□□□□ -0.59
LIMK2-202ENST00000333611 FRMPD2BQ6IN97 320 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 B3GLCTQ6Y288 498 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 LINC00299Q6ZSB3 139 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 ZNF548Q8NEK5 533 aaPredicted RBP11.39□□□□□ -0.59
LIMK2-202ENST00000333611 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.39□□□□□ -0.59
LIMK2-202ENST00000333611 ZNF382Q96SR6 550 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 NIPAL2Q9H841 368 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 NLE1Q9NVX2 485 aaPredicted RBP11.39□□□□□ -0.59
LIMK2-202ENST00000333611 SDHAF2Q9NX18 166 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 NDRG2Q9UN36 371 aaKnown RBP11.39□□□□□ -0.59
LIMK2-202ENST00000333611 TP53BP1Q12888 1972 aaPredicted RBP11.39□□□□□ -0.59
LIMK2-202ENST00000333611 F8W036 122 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 OR7A17O14581 309 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 RFXANKO14593 260 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 STX16O14662 325 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 WISP3O95389 354 aaPredicted RBP11.39□□□□□ -0.59
LIMK2-202ENST00000333611 HPRP00739 348 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 CFDP00746 253 aaPredicted RBP11.39□□□□□ -0.59
LIMK2-202ENST00000333611 CYP17A1P05093 508 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 TSPAN5P62079 268 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 MPP7Q5T2T1 576 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 OR4F3Q6IEY1 312 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 PDE12Q6L8Q7 609 aaKnown RBP11.39□□□□□ -0.59
LIMK2-202ENST00000333611 MTFR2Q6P444 385 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 GLB1LQ6UWU2 654 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 ZFP41Q8N8Y5 198 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 OTUB1Q96FW1 271 aaPredicted RBP11.39□□□□□ -0.59
LIMK2-202ENST00000333611 NIT2Q9NQR4 276 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 NFKBIL1Q9UBC1 381 aaPredicted RBP11.39□□□□□ -0.59
LIMK2-202ENST00000333611 SPASTQ9UBP0 616 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 CRLS1Q9UJA2 301 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 SSR3Q9UNL2 185 aa11.39□□□□□ -0.59
LIMK2-202ENST00000333611 FCF1Q9Y324 198 aaKnown RBP11.39□□□□□ -0.59
LIMK2-202ENST00000333611 CASKO14936 926 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 LYRM1O43325 122 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 COL19A1Q14993 1142 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 PAN3Q58A45 887 aaKnown RBP11.38□□□□□ -0.59
LIMK2-202ENST00000333611 AFMIDQ63HM1 303 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 ZCCHC12Q6PEW1 402 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 SUSD1Q6UWL2 747 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 TRILQ7L0X0 811 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 STK40Q8N2I9 435 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 CARNMT1Q8N4J0 409 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 OR2T35Q8NGX2 323 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 NMRK2Q9NPI5 230 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 TLR8Q9NR97 1041 aaKnown RBP11.38□□□□□ -0.59
LIMK2-202ENST00000333611 SLC22A11Q9NSA0 550 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 ERVK-19Q9WJR5 959 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 PADI2Q9Y2J8 665 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.38□□□□□ -0.59
LIMK2-202ENST00000333611 LRRC72A6NJI9 287 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 MRPS14O60783 128 aaKnown RBP11.38□□□□□ -0.59
LIMK2-202ENST00000333611 OPN1SWP03999 348 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 RAF1P04049 648 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 TNFRSF1BP20333 461 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 RAB3AP20336 220 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 ITPKAP23677 461 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 CDKN2CP42773 168 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 RGS4P49798 205 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 ZNF140P52738 457 aaPredicted RBP11.38□□□□□ -0.59
LIMK2-202ENST00000333611 PURAQ00577 322 aaKnown RBP11.38□□□□□ -0.59
LIMK2-202ENST00000333611 ZNF177Q13360 481 aaPredicted RBP11.38□□□□□ -0.59
LIMK2-202ENST00000333611 CAMK2GQ13555 558 aaPredicted RBP11.38□□□□□ -0.59
LIMK2-202ENST00000333611 ZNF273Q14593 569 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 LRRC73Q5JTD7 316 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 RNF219Q5W0B1 726 aaPredicted RBP11.38□□□□□ -0.59
LIMK2-202ENST00000333611 KIAA1841Q6NSI8 718 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 TSPEARQ8WU66 669 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 MCCC1Q96RQ3 725 aaPredicted RBP11.38□□□□□ -0.59
LIMK2-202ENST00000333611 POLR2J2Q9GZM3 115 aaKnown RBP11.38□□□□□ -0.59
LIMK2-202ENST00000333611 NUDT15Q9NV35 164 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 C1orf109Q9NX04 203 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 GPRC5BQ9NZH0 403 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 DLGAP4Q9Y2H0 992 aa11.38□□□□□ -0.59
LIMK2-202ENST00000333611 PRELID3BQ9Y3B1 194 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms