RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 RPS13P62277 151 aaKnown RBP22.58■■□□□ 1.2
TSKU-201ENST00000333090 MC1RQ01726 317 aa22.58■■□□□ 1.2
TSKU-201ENST00000333090 RBBP4Q09028 425 aa22.58■■□□□ 1.2
TSKU-201ENST00000333090 SLC5A12Q1EHB4 618 aa22.58■■□□□ 1.2
TSKU-201ENST00000333090 CCDC58Q4VC31 144 aa22.58■■□□□ 1.2
TSKU-201ENST00000333090 Q5BKY6 102 aa22.58■■□□□ 1.2
TSKU-201ENST00000333090 EEF1AKMT2Q5JPI9 291 aaKnown RBP22.58■■□□□ 1.2
TSKU-201ENST00000333090 USP45Q70EL2 814 aa22.58■■□□□ 1.2
TSKU-201ENST00000333090 TRIM69Q86WT6 500 aa22.58■■□□□ 1.2
TSKU-201ENST00000333090 UBASH3BQ8TF42 649 aa22.58■■□□□ 1.2
TSKU-201ENST00000333090 RNF170Q96K19 258 aa22.58■■□□□ 1.2
TSKU-201ENST00000333090 OR4K3Q96R72 315 aa22.58■■□□□ 1.2
TSKU-201ENST00000333090 LYSMD1Q96S90 227 aa22.58■■□□□ 1.2
TSKU-201ENST00000333090 ABCB9Q9NP78 766 aa22.58■■□□□ 1.2
TSKU-201ENST00000333090 STUB1Q9UNE7 303 aa22.58■■□□□ 1.2
TSKU-201ENST00000333090 SNX7Q9UNH6 387 aa22.58■■□□□ 1.2
TSKU-201ENST00000333090 CCDC88CQ9P219 2028 aa22.57■■□□□ 1.2
TSKU-201ENST00000333090 CHRNB1P11230 501 aa22.57■■□□□ 1.2
TSKU-201ENST00000333090 SRCP12931 536 aa22.57■■□□□ 1.2
TSKU-201ENST00000333090 PTPN5P54829 565 aa22.57■■□□□ 1.2
TSKU-201ENST00000333090 FCHO2Q0JRZ9 810 aa22.57■■□□□ 1.2
TSKU-201ENST00000333090 GPAT3Q53EU6 434 aa22.57■■□□□ 1.2
TSKU-201ENST00000333090 SPIN4Q56A73 249 aa22.57■■□□□ 1.2
TSKU-201ENST00000333090 LIPKQ5VXJ0 399 aa22.57■■□□□ 1.2
TSKU-201ENST00000333090 AGTRAPQ6RW13 159 aa22.57■■□□□ 1.2
TSKU-201ENST00000333090 TRIM48Q8IWZ4 208 aa22.57■■□□□ 1.2
TSKU-201ENST00000333090 LAS2Q8IYD9 372 aa22.57■■□□□ 1.2
TSKU-201ENST00000333090 BCL7CQ8WUZ0 217 aaPredicted RBP22.57■■□□□ 1.2
TSKU-201ENST00000333090 KLHL6Q8WZ60 621 aa22.57■■□□□ 1.2
TSKU-201ENST00000333090 BRF2Q9HAW0 419 aa22.57■■□□□ 1.2
TSKU-201ENST00000333090 SLC25A19Q9HC21 320 aa22.57■■□□□ 1.2
TSKU-201ENST00000333090 STOML2Q9UJZ1 356 aa22.57■■□□□ 1.2
TSKU-201ENST00000333090 CLEC4EQ9ULY5 219 aa22.57■■□□□ 1.2
TSKU-201ENST00000333090 CDRT1O95170 752 aa22.57■■□□□ 1.2
TSKU-201ENST00000333090 GALK2Q01415 458 aa22.57■■□□□ 1.2
TSKU-201ENST00000333090 LARS2Q15031 903 aaKnown RBP22.57■■□□□ 1.2
TSKU-201ENST00000333090 CCSMST1Q4G0I0 132 aa22.57■■□□□ 1.2
TSKU-201ENST00000333090 TRIM40Q6P9F5 258 aa22.57■■□□□ 1.2
TSKU-201ENST00000333090 OTOP2Q7RTS6 562 aa22.57■■□□□ 1.2
TSKU-201ENST00000333090 BCDIN3DQ7Z5W3 292 aaKnown RBP22.57■■□□□ 1.2
TSKU-201ENST00000333090 OR2AP1Q8NGE2 309 aa22.57■■□□□ 1.2
TSKU-201ENST00000333090 TMEM80Q96HE8 168 aa22.57■■□□□ 1.2
TSKU-201ENST00000333090 WDFY2Q96P53 400 aa22.57■■□□□ 1.2
TSKU-201ENST00000333090 C11orf54Q9H0W9 315 aaPredicted RBP22.57■■□□□ 1.2
TSKU-201ENST00000333090 SSR3Q9UNL2 185 aa22.57■■□□□ 1.2
TSKU-201ENST00000333090 OR2AG2A6NM03 316 aa22.56■■□□□ 1.2
TSKU-201ENST00000333090 HBQ1P09105 142 aa22.56■■□□□ 1.2
TSKU-201ENST00000333090 HSD3B1P14060 373 aa22.56■■□□□ 1.2
TSKU-201ENST00000333090 ZNF8P17098 575 aaPredicted RBP22.56■■□□□ 1.2
TSKU-201ENST00000333090 HSD3B2P26439 372 aa22.56■■□□□ 1.2
TSKU-201ENST00000333090 SOAT1P35610 550 aa22.56■■□□□ 1.2
TSKU-201ENST00000333090 ARPC4P59998 168 aa22.56■■□□□ 1.2
TSKU-201ENST00000333090 CHRNEQ04844 493 aa22.56■■□□□ 1.2
TSKU-201ENST00000333090 ELAVL2Q12926 359 aaKnown RBP22.56■■□□□ 1.2
TSKU-201ENST00000333090 TCTN1Q2MV58 587 aa22.56■■□□□ 1.2
TSKU-201ENST00000333090 PAQR6Q6TCH4 344 aa22.56■■□□□ 1.2
TSKU-201ENST00000333090 GDPGP1Q6ZNW5 385 aa22.56■■□□□ 1.2
TSKU-201ENST00000333090 OXR1Q8N573 874 aa22.56■■□□□ 1.2
TSKU-201ENST00000333090 SAMD11Q96NU1 681 aa22.56■■□□□ 1.2
TSKU-201ENST00000333090 CASD1Q96PB1 797 aa22.56■■□□□ 1.2
TSKU-201ENST00000333090 BHLHE41Q9C0J9 482 aaPredicted RBP22.56■■□□□ 1.2
TSKU-201ENST00000333090 REEP4Q9H6H4 257 aa22.56■■□□□ 1.2
TSKU-201ENST00000333090 RPRD1BQ9NQG5 326 aaKnown RBP22.56■■□□□ 1.2
TSKU-201ENST00000333090 PLXNB3Q9ULL4 1909 aa22.56■■□□□ 1.2
TSKU-201ENST00000333090 TRBV4-1A0A0J9YWV2 114 aa22.56■■□□□ 1.2
TSKU-201ENST00000333090 IFNA14P01570 189 aa22.56■■□□□ 1.2
TSKU-201ENST00000333090 IFNW1P05000 195 aa22.56■■□□□ 1.2
TSKU-201ENST00000333090 CHRM5P08912 532 aaPredicted RBP22.56■■□□□ 1.2
TSKU-201ENST00000333090 TRAPPC2P0DI81 140 aa22.56■■□□□ 1.2
TSKU-201ENST00000333090 TRAPPC2BP0DI82 140 aa22.56■■□□□ 1.2
TSKU-201ENST00000333090 RHCEP18577 417 aa22.56■■□□□ 1.2
TSKU-201ENST00000333090 POLR2EP19388 210 aaKnown RBP22.56■■□□□ 1.2
TSKU-201ENST00000333090 DUSP7Q16829 419 aa22.56■■□□□ 1.2
TSKU-201ENST00000333090 GPR65Q8IYL9 337 aa22.56■■□□□ 1.2
TSKU-201ENST00000333090 METTL2AQ96IZ6 378 aaKnown RBP22.56■■□□□ 1.2
TSKU-201ENST00000333090 GDF15Q99988 308 aa22.56■■□□□ 1.2
TSKU-201ENST00000333090 SLA2Q9H6Q3 261 aa22.56■■□□□ 1.2
TSKU-201ENST00000333090 MAPRE3Q9UPY8 281 aa22.56■■□□□ 1.2
TSKU-201ENST00000333090 PCDHB7Q9Y5E2 793 aa22.56■■□□□ 1.2
TSKU-201ENST00000333090 SNX11Q9Y5W9 270 aa22.56■■□□□ 1.2
TSKU-201ENST00000333090 TMEM202A6NGA9 273 aa22.55■■□□□ 1.2
TSKU-201ENST00000333090 SAP18O00422 153 aaKnown RBP22.55■■□□□ 1.2
TSKU-201ENST00000333090 TMCC2O75069 709 aa22.55■■□□□ 1.2
TSKU-201ENST00000333090 MYL9P24844 172 aa22.55■■□□□ 1.2
TSKU-201ENST00000333090 STK19P49842 368 aaPredicted RBP22.55■■□□□ 1.2
TSKU-201ENST00000333090 ELOAQ14241 798 aaKnown RBP22.55■■□□□ 1.2
TSKU-201ENST00000333090 CRB2Q5IJ48 1285 aa22.55■■□□□ 1.2
TSKU-201ENST00000333090 PDZK1Q5T2W1 519 aa22.55■■□□□ 1.2
TSKU-201ENST00000333090 WDR53Q7Z5U6 358 aaPredicted RBP22.55■■□□□ 1.2
TSKU-201ENST00000333090 DIRAS2Q96HU8 199 aa22.55■■□□□ 1.2
TSKU-201ENST00000333090 TMEM38AQ9H6F2 299 aa22.55■■□□□ 1.2
TSKU-201ENST00000333090 TET1Q8NFU7 2136 aa22.55■■□□□ 1.2
TSKU-201ENST00000333090 PDE4DIPQ5VU43 2346 aa22.55■■□□□ 1.2
TSKU-201ENST00000333090 HYKKA2RU49 373 aa22.55■■□□□ 1.2
TSKU-201ENST00000333090 SLC35F4A4IF30 521 aa22.55■■□□□ 1.2
TSKU-201ENST00000333090 H3BN98 237 aa22.55■■□□□ 1.2
TSKU-201ENST00000333090 PLD2O14939 933 aa22.55■■□□□ 1.2
TSKU-201ENST00000333090 GALTP07902 379 aa22.55■■□□□ 1.2
TSKU-201ENST00000333090 GNG2P59768 71 aa22.55■■□□□ 1.2
TSKU-201ENST00000333090 EEF1A2Q05639 463 aaKnown RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms