RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 CRADDP78560 199 aa13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 TMED2Q15363 201 aa13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 CLEC12BQ2HXU8 276 aa13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 RNF187Q5TA31 235 aaPredicted RBP13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 PTRHD1Q6GMV3 140 aaKnown RBP13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 GPALPP1Q8IXQ4 340 aa13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 PEX11GQ96HA9 241 aa13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 ZNF778Q96MU6 729 aa13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 PANX3Q96QZ0 392 aa13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 OR1F2PQ96R84 312 aa13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 TCF12Q99081 682 aa13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 WDR83Q9BRX9 315 aaKnown RBP13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 SGPP1Q9BX95 441 aa13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 BEX2Q9BXY8 128 aa13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 DDX47Q9H0S4 455 aaKnown RBP13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 TREX1Q9NSU2 369 aa13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 SYBUQ9NX95 663 aa13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 NDRG3Q9UGV2 375 aa13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 FBXW2Q9UKT8 454 aa13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 TESMINQ9Y4I5 508 aa13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 MAD1L1Q9Y6D9 718 aa13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 TCRBV7S3A2A0A539 114 aa13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 AHRRA9YTQ3 701 aa13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 H3BMM5 538 aa13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 GOLGA8MH3BSY2 632 aa13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 SMAPO00193 183 aa13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 KPNA5O15131 536 aa13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 CTIFO43310 598 aaKnown RBP13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 RDH16O75452 317 aa13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 C1orf105O95561 183 aa13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 APOA4P06727 396 aa13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 CNR1P21554 472 aa13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 CTSSP25774 331 aa13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 NMBRP28336 390 aa13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 OPRM1P35372 400 aa13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 ADARP55265 1226 aaKnown RBP13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 DR1Q01658 176 aa13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 RELAQ04206 551 aa13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 FOXO1Q12778 655 aa13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 THOC5Q13769 683 aaKnown RBP13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 PLEKHM3Q6ZWE6 761 aa13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 CREG2Q8IUH2 290 aa13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 KLHL7Q8IXQ5 586 aa13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 APCDD1LQ8NCL9 501 aa13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 TMEM171Q8WVE6 324 aa13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 HSPBAP1Q96EW2 488 aa13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 PIK3IP1Q96FE7 263 aa13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 CXorf56Q9H5V9 222 aa13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 YARS2Q9Y2Z4 477 aaKnown RBP13.62□□□□□ -0.23
CTHRC1-201ENST00000330295 DOCK7Q96N67 2140 aa13.61□□□□□ -0.23
CTHRC1-201ENST00000330295 IL18BPO95998 194 aa13.61□□□□□ -0.23
CTHRC1-201ENST00000330295 CFPP27918 469 aa13.61□□□□□ -0.23
CTHRC1-201ENST00000330295 CLCN2P51788 898 aa13.61□□□□□ -0.23
CTHRC1-201ENST00000330295 ETF1P62495 437 aaKnown RBP13.61□□□□□ -0.23
CTHRC1-201ENST00000330295 MEF2AQ02078 507 aaPredicted RBP13.61□□□□□ -0.23
CTHRC1-201ENST00000330295 DHX34Q14147 1143 aaKnown RBP13.61□□□□□ -0.23
CTHRC1-201ENST00000330295 UBAP2Q5T6F2 1119 aaKnown RBP13.61□□□□□ -0.23
CTHRC1-201ENST00000330295 ANKRD22Q5VYY1 191 aa13.61□□□□□ -0.23
CTHRC1-201ENST00000330295 IL20RBQ6UXL0 311 aa13.61□□□□□ -0.23
CTHRC1-201ENST00000330295 ZNF534Q76KX8 674 aa13.61□□□□□ -0.23
CTHRC1-201ENST00000330295 OTOAQ7RTW8 1153 aa13.61□□□□□ -0.23
CTHRC1-201ENST00000330295 CAND1Q86VP6 1230 aaKnown RBP13.61□□□□□ -0.23
CTHRC1-201ENST00000330295 PLD3Q8IV08 490 aa13.61□□□□□ -0.23
CTHRC1-201ENST00000330295 CALML6Q8TD86 181 aa13.61□□□□□ -0.23
CTHRC1-201ENST00000330295 ASB15Q8WXK1 588 aa13.61□□□□□ -0.23
CTHRC1-201ENST00000330295 MFSD3Q96ES6 412 aa13.61□□□□□ -0.23
CTHRC1-201ENST00000330295 SERPINB12Q96P63 405 aa13.61□□□□□ -0.23
CTHRC1-201ENST00000330295 NAT9Q9BTE0 207 aa13.61□□□□□ -0.23
CTHRC1-201ENST00000330295 CARD6Q9BX69 1037 aa13.61□□□□□ -0.23
CTHRC1-201ENST00000330295 ANKHQ9HCJ1 492 aa13.61□□□□□ -0.23
CTHRC1-201ENST00000330295 SPATA7Q9P0W8 599 aa13.61□□□□□ -0.23
CTHRC1-201ENST00000330295 DNALI1O14645 258 aaPredicted RBP13.6□□□□□ -0.23
CTHRC1-201ENST00000330295 HAT1O14929 419 aa13.6□□□□□ -0.23
CTHRC1-201ENST00000330295 OR1I1O60431 355 aa13.6□□□□□ -0.23
CTHRC1-201ENST00000330295 AVILO75366 819 aa13.6□□□□□ -0.23
CTHRC1-201ENST00000330295 OR6B1O95007 311 aa13.6□□□□□ -0.23
CTHRC1-201ENST00000330295 FHP07954 510 aa13.6□□□□□ -0.23
CTHRC1-201ENST00000330295 RPA3P35244 121 aaPredicted RBP13.6□□□□□ -0.23
CTHRC1-201ENST00000330295 ANKRD20A4Q4UJ75 823 aa13.6□□□□□ -0.23
CTHRC1-201ENST00000330295 C6orf52Q5T4I8 152 aa13.6□□□□□ -0.23
CTHRC1-201ENST00000330295 TMEM214Q6NUQ4 689 aaKnown RBP13.6□□□□□ -0.23
CTHRC1-201ENST00000330295 NEPROQ6NW34 567 aa13.6□□□□□ -0.23
CTHRC1-201ENST00000330295 SUSD1Q6UWL2 747 aa13.6□□□□□ -0.23
CTHRC1-201ENST00000330295 CES3Q6UWW8 571 aa13.6□□□□□ -0.23
CTHRC1-201ENST00000330295 PDSS2Q86YH6 399 aa13.6□□□□□ -0.23
CTHRC1-201ENST00000330295 LMNTD2Q8IXW0 634 aa13.6□□□□□ -0.23
CTHRC1-201ENST00000330295 NAT8LQ8N9F0 302 aa13.6□□□□□ -0.23
CTHRC1-201ENST00000330295 LKAAEAR1Q8TD35 194 aa13.6□□□□□ -0.23
CTHRC1-201ENST00000330295 NTNG2Q96CW9 530 aa13.6□□□□□ -0.23
CTHRC1-201ENST00000330295 ADAM19Q9H013 955 aa13.6□□□□□ -0.23
CTHRC1-201ENST00000330295 TUBA8Q9NY65 449 aaPredicted RBP13.6□□□□□ -0.23
CTHRC1-201ENST00000330295 MRFAP1Q9Y605 127 aa13.6□□□□□ -0.23
CTHRC1-201ENST00000330295 NCKAP5O14513 1909 aa13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 ERN1O75460 977 aaKnown RBP13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 OR2J2O76002 312 aa13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 TTC4O95801 387 aa13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 EGR1P18146 543 aa13.59□□□□□ -0.23
CTHRC1-201ENST00000330295 OGNP20774 298 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms