RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 DMRT3Q9NQL9 472 aa25.88■■□□□ 1.73
ATPAF1-201ENST00000329231 PSMC3IPQ9P2W1 217 aaPredicted RBP25.88■■□□□ 1.73
ATPAF1-201ENST00000329231 RP1L1Q8IWN7 2480 aaPredicted RBP25.88■■□□□ 1.73
ATPAF1-201ENST00000329231 SYNDIG1LA6NDD5 238 aa25.87■■□□□ 1.73
ATPAF1-201ENST00000329231 OR5H15A6NDH6 313 aa25.87■■□□□ 1.73
ATPAF1-201ENST00000329231 CYR61O00622 381 aa25.87■■□□□ 1.73
ATPAF1-201ENST00000329231 SCELO95171 688 aa25.87■■□□□ 1.73
ATPAF1-201ENST00000329231 CLDN9O95484 217 aa25.87■■□□□ 1.73
ATPAF1-201ENST00000329231 F10P00742 488 aa25.87■■□□□ 1.73
ATPAF1-201ENST00000329231 HIST1H1TP22492 207 aaPredicted RBP25.87■■□□□ 1.73
ATPAF1-201ENST00000329231 ARL1P40616 181 aaPredicted RBP25.87■■□□□ 1.73
ATPAF1-201ENST00000329231 SSR2P43308 183 aa25.87■■□□□ 1.73
ATPAF1-201ENST00000329231 CCNG1P51959 295 aa25.87■■□□□ 1.73
ATPAF1-201ENST00000329231 UBAP2LQ14157 1087 aaKnown RBP25.87■■□□□ 1.73
ATPAF1-201ENST00000329231 CPSF6Q16630 551 aaKnown RBP eCLIP25.87■■□□□ 1.73
ATPAF1-201ENST00000329231 FCRLBQ6BAA4 426 aa25.87■■□□□ 1.73
ATPAF1-201ENST00000329231 ZNF793Q6ZN11 406 aa25.87■■□□□ 1.73
ATPAF1-201ENST00000329231 LCA5Q86VQ0 697 aa25.87■■□□□ 1.73
ATPAF1-201ENST00000329231 SUN3Q8TAQ9 357 aa25.87■■□□□ 1.73
ATPAF1-201ENST00000329231 ELP5Q8TE02 316 aa25.87■■□□□ 1.73
ATPAF1-201ENST00000329231 MTERF1Q99551 399 aaKnown RBP25.87■■□□□ 1.73
ATPAF1-201ENST00000329231 NTNG1Q9Y2I2 539 aa25.87■■□□□ 1.73
ATPAF1-201ENST00000329231 RNF11Q9Y3C5 154 aa25.87■■□□□ 1.73
ATPAF1-201ENST00000329231 SPACA6W5XKT8 324 aa25.87■■□□□ 1.73
ATPAF1-201ENST00000329231 CLEC18AA5D8T8 446 aa25.86■■□□□ 1.73
ATPAF1-201ENST00000329231 A8MUA0 341 aa25.86■■□□□ 1.73
ATPAF1-201ENST00000329231 RTCAO00442 366 aaKnown RBP25.86■■□□□ 1.73
ATPAF1-201ENST00000329231 PTX3P26022 381 aaPredicted RBP25.86■■□□□ 1.73
ATPAF1-201ENST00000329231 DEKP35659 375 aaKnown RBP25.86■■□□□ 1.73
ATPAF1-201ENST00000329231 RAP1GDS1P52306 607 aa25.86■■□□□ 1.73
ATPAF1-201ENST00000329231 HNRNPFP52597 415 aaKnown RBP25.86■■□□□ 1.73
ATPAF1-201ENST00000329231 NR6A1Q15406 480 aa25.86■■□□□ 1.73
ATPAF1-201ENST00000329231 TERF2Q15554 542 aa25.86■■□□□ 1.73
ATPAF1-201ENST00000329231 CLEC18BQ6UXF7 455 aa25.86■■□□□ 1.73
ATPAF1-201ENST00000329231 CRLF3Q8IUI8 442 aa25.86■■□□□ 1.73
ATPAF1-201ENST00000329231 LGI4Q8N135 537 aa25.86■■□□□ 1.73
ATPAF1-201ENST00000329231 BEST3Q8N1M1 668 aa25.86■■□□□ 1.73
ATPAF1-201ENST00000329231 FAM26EQ8N5C1 309 aa25.86■■□□□ 1.73
ATPAF1-201ENST00000329231 CLEC18CQ8NCF0 446 aa25.86■■□□□ 1.73
ATPAF1-201ENST00000329231 TMEM52Q8NDY8 209 aa25.86■■□□□ 1.73
ATPAF1-201ENST00000329231 RGMAQ96B86 450 aa25.86■■□□□ 1.73
ATPAF1-201ENST00000329231 CSF3RQ99062 836 aa25.86■■□□□ 1.73
ATPAF1-201ENST00000329231 KCMF1Q9P0J7 381 aa25.86■■□□□ 1.73
ATPAF1-201ENST00000329231 PCTPQ9UKL6 214 aa25.86■■□□□ 1.73
ATPAF1-201ENST00000329231 SAP18O00422 153 aaKnown RBP25.85■■□□□ 1.73
ATPAF1-201ENST00000329231 OR7A17O14581 309 aa25.85■■□□□ 1.73
ATPAF1-201ENST00000329231 ARFIP1P53367 373 aa25.85■■□□□ 1.73
ATPAF1-201ENST00000329231 VSNL1P62760 191 aa25.85■■□□□ 1.73
ATPAF1-201ENST00000329231 INAQ16352 499 aa25.85■■□□□ 1.73
ATPAF1-201ENST00000329231 OR4C11Q6IEV9 310 aa25.85■■□□□ 1.73
ATPAF1-201ENST00000329231 FAM180AQ6UWF9 173 aa25.85■■□□□ 1.73
ATPAF1-201ENST00000329231 RNF175Q8N4F7 328 aa25.85■■□□□ 1.73
ATPAF1-201ENST00000329231 NFAM1Q8NET5 270 aaPredicted RBP25.85■■□□□ 1.73
ATPAF1-201ENST00000329231 GRHL3Q8TE85 626 aa25.85■■□□□ 1.73
ATPAF1-201ENST00000329231 NTMT1Q9BV86 223 aa25.85■■□□□ 1.73
ATPAF1-201ENST00000329231 PNO1Q9NRX1 252 aaKnown RBP25.85■■□□□ 1.73
ATPAF1-201ENST00000329231 CPAMD8Q8IZJ3 1885 aa25.85■■□□□ 1.73
ATPAF1-201ENST00000329231 BLACEA4D250 179 aa25.84■■□□□ 1.73
ATPAF1-201ENST00000329231 CTNSO60931 367 aa25.84■■□□□ 1.73
ATPAF1-201ENST00000329231 RPS13P62277 151 aaKnown RBP25.84■■□□□ 1.73
ATPAF1-201ENST00000329231 MRPL49Q13405 166 aaKnown RBP25.84■■□□□ 1.73
ATPAF1-201ENST00000329231 ZRSR2Q15696 482 aaKnown RBP25.84■■□□□ 1.73
ATPAF1-201ENST00000329231 WDR93Q6P2C0 686 aa25.84■■□□□ 1.73
ATPAF1-201ENST00000329231 TMEM151AQ8N4L1 468 aa25.84■■□□□ 1.73
ATPAF1-201ENST00000329231 OR52B6Q8NGF0 335 aa25.84■■□□□ 1.73
ATPAF1-201ENST00000329231 ACMSDQ8TDX5 336 aa25.84■■□□□ 1.73
ATPAF1-201ENST00000329231 UBLCP1Q8WVY7 318 aaPredicted RBP25.84■■□□□ 1.73
ATPAF1-201ENST00000329231 NPAS2Q99743 824 aa25.84■■□□□ 1.73
ATPAF1-201ENST00000329231 MAPKAP1Q9BPZ7 522 aa25.84■■□□□ 1.73
ATPAF1-201ENST00000329231 PSD3Q9NYI0 1048 aa25.84■■□□□ 1.73
ATPAF1-201ENST00000329231 CLDN16Q9Y5I7 305 aa25.84■■□□□ 1.73
ATPAF1-201ENST00000329231 FOXE1O00358 373 aaPredicted RBP25.83■■□□□ 1.73
ATPAF1-201ENST00000329231 MYO1DO94832 1006 aa25.83■■□□□ 1.73
ATPAF1-201ENST00000329231 CBX6O95503 412 aa25.83■■□□□ 1.73
ATPAF1-201ENST00000329231 SBK3P0C264 359 aa25.83■■□□□ 1.73
ATPAF1-201ENST00000329231 TAC1P20366 129 aa25.83■■□□□ 1.73
ATPAF1-201ENST00000329231 FHL5Q5TD97 284 aa25.83■■□□□ 1.73
ATPAF1-201ENST00000329231 CLNKQ7Z7G1 428 aa25.83■■□□□ 1.73
ATPAF1-201ENST00000329231 RPS19BP1Q86WX3 136 aaKnown RBP25.83■■□□□ 1.73
ATPAF1-201ENST00000329231 KIF2BQ8N4N8 673 aa25.83■■□□□ 1.73
ATPAF1-201ENST00000329231 B3GNT7Q8NFL0 401 aa25.83■■□□□ 1.73
ATPAF1-201ENST00000329231 WDR20Q8TBZ3 569 aa25.83■■□□□ 1.73
ATPAF1-201ENST00000329231 FAR1Q8WVX9 515 aa25.83■■□□□ 1.73
ATPAF1-201ENST00000329231 NSUN5Q96P11 429 aaKnown RBP25.83■■□□□ 1.73
ATPAF1-201ENST00000329231 CDK15Q96Q40 435 aa25.83■■□□□ 1.73
ATPAF1-201ENST00000329231 UTP23Q9BRU9 249 aaKnown RBP25.83■■□□□ 1.73
ATPAF1-201ENST00000329231 CDCP1Q9H5V8 836 aa25.83■■□□□ 1.73
ATPAF1-201ENST00000329231 ADAP2Q9NPF8 381 aa25.83■■□□□ 1.73
ATPAF1-201ENST00000329231 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.83■■□□□ 1.73
ATPAF1-201ENST00000329231 V9GYY5 206 aaPredicted RBP25.83■■□□□ 1.73
ATPAF1-201ENST00000329231 RELNP78509 3460 aa25.82■■□□□ 1.72
ATPAF1-201ENST00000329231 A8MT66 165 aa25.82■■□□□ 1.72
ATPAF1-201ENST00000329231 TGFBR3LH3BV60 316 aa25.82■■□□□ 1.72
ATPAF1-201ENST00000329231 PLPP1O14494 284 aa25.82■■□□□ 1.72
ATPAF1-201ENST00000329231 CDK2AP1O14519 115 aa25.82■■□□□ 1.72
ATPAF1-201ENST00000329231 PRAMEF2O60811 474 aa25.82■■□□□ 1.72
ATPAF1-201ENST00000329231 RPS17P08708 135 aaKnown RBP25.82■■□□□ 1.72
ATPAF1-201ENST00000329231 CPN2P22792 545 aa25.82■■□□□ 1.72
ATPAF1-201ENST00000329231 STX4Q12846 297 aa25.82■■□□□ 1.72
ATPAF1-201ENST00000329231 SLAMF1Q13291 335 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms