RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ATP6V1G2-DDX39BF2Z307 99 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 TLR4O00206 839 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 QSOX1O00391 747 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 PRMT3O60678 531 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 SLC25A14O95258 325 aaPredicted RBP12.23□□□□□ -0.45
CCDC60-201ENST00000327554 GASTP01350 101 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 RAF1P04049 648 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 HMBSP08397 361 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 ZNF865P0CJ78 1059 aaPredicted RBP12.23□□□□□ -0.45
CCDC60-201ENST00000327554 ICAM2P13598 275 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 PCSK2P16519 638 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 POU1F1P28069 291 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 XCR1P46094 333 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 HMGA2P52926 109 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 POU4F3Q15319 338 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 TEAD4Q15561 434 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 GGTA1PQ4G0N0 100 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 RNLSQ5VYX0 342 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 TMIGD1Q6UXZ0 262 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 COMMD7Q86VX2 200 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 CLDN19Q8N6F1 224 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 TMEM203Q969S6 136 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 EID2BQ96D98 161 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 KATNAL1Q9BW62 490 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 SLC32A1Q9H598 525 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 RDH14Q9HBH5 336 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 ZFP64Q9NPA5 681 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 ENOPH1Q9UHY7 261 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 YARS2Q9Y2Z4 477 aaKnown RBP12.23□□□□□ -0.45
CCDC60-201ENST00000327554 TDRD15B5MCY1 1934 aaKnown RBP12.23□□□□□ -0.45
CCDC60-201ENST00000327554 CHP2O43745 196 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 F11P03951 625 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 TPOP07202 933 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 DDCP20711 480 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 STK19P49842 368 aaPredicted RBP12.23□□□□□ -0.45
CCDC60-201ENST00000327554 CAV3P56539 151 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 PPP3R1P63098 170 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 ZNF91Q05481 1191 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 SF3A2Q15428 464 aaKnown RBP12.23□□□□□ -0.45
CCDC60-201ENST00000327554 ZNF770Q6IQ21 691 aaPredicted RBP12.23□□□□□ -0.45
CCDC60-201ENST00000327554 TRILQ7L0X0 811 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 KIF18BQ86Y91 864 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 MIB1Q86YT6 1006 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 GPR65Q8IYL9 337 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 CFAP52Q8N1V2 620 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 OR52P1PQ8NH57 321 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 ZNF431Q8TF32 576 aaPredicted RBP12.23□□□□□ -0.45
CCDC60-201ENST00000327554 PIP5K1AQ99755 562 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 NMNAT1Q9HAN9 279 aaPredicted RBP12.23□□□□□ -0.45
CCDC60-201ENST00000327554 UCKL1Q9NWZ5 548 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 MRPL39Q9NYK5 338 aaKnown RBP12.23□□□□□ -0.45
CCDC60-201ENST00000327554 IL17CQ9P0M4 197 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 KIAA1671Q9BY89 1806 aa12.23□□□□□ -0.45
CCDC60-201ENST00000327554 PRAMEF4O60810 478 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 B3GAT3O94766 335 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 PRAMEF12O95522 483 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 F2P00734 622 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 CHRM5P08912 532 aaPredicted RBP12.22□□□□□ -0.45
CCDC60-201ENST00000327554 OR4Q2P0C623 313 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 GLULP15104 373 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 CPEP16870 476 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 HK1P19367 917 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 FEN1P39748 380 aaKnown RBP12.22□□□□□ -0.45
CCDC60-201ENST00000327554 GPR15P49685 360 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 KCNC3Q14003 757 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 FCN2Q15485 313 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 KLHL22Q53GT1 634 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 GPRC6AQ5T6X5 926 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 PRAMEF9Q5VWM5 478 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 GPR139Q6DWJ6 353 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 BRAT1Q6PJG6 821 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 PLEKHM3Q6ZWE6 761 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 SERPINA9Q86WD7 417 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 GPALPP1Q8IXQ4 340 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 ZBTB2Q8N680 514 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 AP3S1Q92572 193 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 KCTD7Q96MP8 289 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 TCF25Q9BQ70 676 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 PIGUQ9H490 435 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 RERGLQ9H628 205 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 FAM105AQ9NUU6 356 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 GPATCH2Q9NW75 528 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 FLRT1Q9NZU1 646 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 COMMD3Q9UBI1 195 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 MGAT4AQ9UM21 535 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 FAM227AF5H4B4 570 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 SGK494L7N484 410 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 NFKBIEO00221 500 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 LRRTM2O43300 516 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 HPGDSO60760 199 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 MTRF1O75570 445 aaKnown RBP12.22□□□□□ -0.45
CCDC60-201ENST00000327554 ZNF7P17097 686 aaPredicted RBP12.22□□□□□ -0.45
CCDC60-201ENST00000327554 LHCGRP22888 699 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 IRS1P35568 1242 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 HMGCLP35914 325 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 CLCNKAP51800 687 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 MVDP53602 400 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 ATN1P54259 1190 aaPredicted RBP12.22□□□□□ -0.45
CCDC60-201ENST00000327554 RIN1Q13671 783 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 GALEQ14376 348 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms