RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 UBE2QL1A1L167 161 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 DUXAA6NLW8 204 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 PRAMEF10O60809 474 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 FUCA1P04066 466 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 CMPK1P30085 196 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 PCGF2P35227 344 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 COMMD6Q7Z4G1 85 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 IQCHQ86VS3 1027 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 ASCC1Q8N9N2 400 aaKnown RBP14.14□□□□□ -0.15
TCOF1-201ENST00000323668 FIBINQ8TAL6 211 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 EFHD2Q96C19 240 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-201ENST00000323668 TNFRSF10DQ9UBN6 386 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 NCKAP1Q9Y2A7 1128 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 CLDN24A6NM45 220 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 NUAK1O60285 661 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 MMP20O60882 483 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 CD9P21926 228 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 STXBP1P61764 594 aaKnown RBP14.14□□□□□ -0.15
TCOF1-201ENST00000323668 DSC1Q08554 894 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 DEFB115Q30KQ5 88 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 FAM220AQ7Z4H9 259 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 TMED9Q9BVK6 235 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 STOX2Q9P2F5 926 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-201ENST00000323668 GABARAPO95166 117 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 CPNE6O95741 557 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 GSTM4Q03013 218 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 ST3GAL3Q11203 375 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 LASP1Q14847 261 aaKnown RBP14.14□□□□□ -0.15
TCOF1-201ENST00000323668 NUDT8Q8WV74 236 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 ZFP3Q96NJ6 502 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 C1QTNF3Q9BXJ4 246 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 MROQ9BYG7 248 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 LHX3Q9UBR4 397 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 OR10H1Q9Y4A9 318 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 GSAPA4D1B5 854 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 ERI3O43414 337 aaKnown RBP14.13□□□□□ -0.15
TCOF1-201ENST00000323668 NOS1APO75052 506 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-201ENST00000323668 ADAP00813 363 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 DAPP51397 102 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 VLDLRP98155 873 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 TBCEQ15813 527 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-201ENST00000323668 DCUN1D3Q8IWE4 304 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 OR4C6Q8NH72 309 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 P2RY13Q9BPV8 354 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 CPNE3O75131 537 aaKnown RBP14.13□□□□□ -0.15
TCOF1-201ENST00000323668 KHDRBS3O75525 346 aaKnown RBP14.13□□□□□ -0.15
TCOF1-201ENST00000323668 CDK1P06493 297 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 SRCP12931 536 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 CLCNKAP51800 687 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 ISL1P61371 349 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 ASB18Q6ZVZ8 466 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 OTOP2Q7RTS6 562 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 LIMS2Q7Z4I7 341 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 KLF16Q9BXK1 252 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-201ENST00000323668 ARHGAP39Q9C0H5 1083 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 OR2B2Q9GZK3 357 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 RNF38Q9H0F5 515 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 TCRBV5S2A0A599 114 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 BMP4P12644 408 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 WASP42768 502 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 PCDH1Q08174 1060 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 ATAT1Q5SQI0 421 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 ADNP2Q6IQ32 1131 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 RNF44Q7L0R7 432 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.13□□□□□ -0.159e-8■□□□□ 9.8
TCOF1-201ENST00000323668 SAMD14Q8IZD0 417 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-201ENST00000323668 SIX5Q8N196 739 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 ZNF433Q8N7K0 673 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-201ENST00000323668 OR10G6Q8NH81 332 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 ASB11Q8WXH4 323 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 IRF7Q92985 503 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 AMBRA1Q9C0C7 1298 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 DIABLOQ9NR28 239 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 WNT6Q9Y6F9 365 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 GABRR3A8MPY1 467 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 H0YC42 278 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 FKTNO75072 461 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 ARPC4P59998 168 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 RPS26P62854 115 aaKnown RBP14.13□□□□□ -0.15
TCOF1-201ENST00000323668 PPP2R2BQ00005 443 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 ZNF805Q5CZA5 627 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 DESI1Q6ICB0 168 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 LRRTM4Q86VH4 590 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 MEIOBQ8N635 442 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 SNX33Q8WV41 574 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 TBX5Q99593 518 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 BTBD1Q9H0C5 482 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 MRPS30Q9NP92 439 aaKnown RBP14.13□□□□□ -0.15
TCOF1-201ENST00000323668 IFT52Q9Y366 437 aa14.13□□□□□ -0.15
TCOF1-201ENST00000323668 CPSF4LA6NMK7 179 aaKnown RBP14.12□□□□□ -0.15
TCOF1-201ENST00000323668 ACSL1P33121 698 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 CA5AP35218 305 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 HOXD12P35452 270 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 SLC36A4Q6YBV0 504 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 C6orf120Q7Z4R8 191 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 LKAAEAR1Q8TD35 194 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 METTL2AQ96IZ6 378 aaKnown RBP14.12□□□□□ -0.15
TCOF1-201ENST00000323668 BRF2Q9HAW0 419 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 ANKMY1Q9P2S6 941 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 UBR3Q6ZT12 1888 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms