RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 OR1G1P47890 313 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 CXCR3P49682 368 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 SCNN1GP51170 649 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 TPMTP51580 245 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 SCGB2B2Q4G0G5 96 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 MPPE1Q53F39 396 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 REEP3Q6NUK4 255 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 PPP1R13LQ8WUF5 828 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 FATE1Q969F0 183 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 SGK3Q96BR1 496 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 RTP4Q96DX8 246 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 CNTNAP3BQ96NU0 1288 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 PDCD2LQ9BRP1 358 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 CCM2Q9BSQ5 444 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 SLC38A1Q9H2H9 487 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 MYOZ2Q9NPC6 264 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 ASF1BQ9NVP2 202 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 PCDHGB2Q9Y5G2 931 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 A0A0G2JMZ2 1700 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 LRRC37A2A6NM11 1700 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 LRRC37AA6NMS7 1700 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 EXPH5Q8NEV8 1989 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 OR6C65A6NJZ3 312 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 GMFGO60234 142 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 SPDEFO95238 335 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 CPNE6O95741 557 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 DDX6P26196 483 aaKnown RBP eCLIP6.81□□□□□ -1.329e-13■□□□□ 8
SMC1A-201ENST00000322213 RAB4BP61018 213 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 RETSATQ6NUM9 610 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 CDHR3Q6ZTQ4 885 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 NAP1L6A6NFF2 107 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 J3KR12 359 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 GKN3PP0CG01 181 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 PRKACGP22612 351 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 GRK5P34947 590 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 S100A10P60903 97 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 BAK1Q16611 211 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 TECRLQ5HYJ1 363 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 FAM69AQ5T7M9 428 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 CES5AQ6NT32 575 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 ARL9Q6T311 187 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 FCRL2Q96LA5 508 aaPredicted RBP6.81□□□□□ -1.32
SMC1A-201ENST00000322213 CDK15Q96Q40 435 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 PKP4Q99569 1192 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 INTS7Q9NVH2 962 aaKnown RBP6.81□□□□□ -1.32
SMC1A-201ENST00000322213 SLC27A5Q9Y2P5 690 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 OBSL1O75147 1896 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 E9PI62 339 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 SLC25A14O95258 325 aaPredicted RBP6.81□□□□□ -1.32
SMC1A-201ENST00000322213 VNN1O95497 513 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 AHSGP02765 367 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 PRKAG1P54619 331 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 POU4F2Q12837 409 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 CAPSQ13938 189 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 FBXO48Q5FWF7 155 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 ZNF648Q5T619 568 aaPredicted RBP6.81□□□□□ -1.32
SMC1A-201ENST00000322213 TXNRD3NBQ6F5E7 133 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 KIAA1161Q6NSJ0 714 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 FTMTQ8N4E7 242 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 CNOT9Q92600 299 aaKnown RBP6.81□□□□□ -1.32
SMC1A-201ENST00000322213 POTEKPQ9BYX7 375 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 TNKS2Q9H2K2 1166 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 SDHAF2Q9NX18 166 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 C14orf166Q9Y224 244 aaKnown RBP6.81□□□□□ -1.32
SMC1A-201ENST00000322213 AP1M2Q9Y6Q5 423 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 LOC100509620A0A075B734 347 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 MCIDASD6RGH6 385 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 SCGNO76038 276 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 ZDHHC11BP0C7U3 371 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 CBSLP0DN79 551 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 ITPKAP23677 461 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 CBSP35520 551 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 PRKXP51817 358 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 C1QTNF8P60827 252 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 GRIN2CQ14957 1233 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 LY6KQ17RY6 165 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 PLPPR4Q7Z2D5 763 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 NRARPQ7Z6K4 114 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 VSIG10LQ86VR7 867 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 FAM83FQ8NEG4 500 aaPredicted RBP6.8□□□□□ -1.32
SMC1A-201ENST00000322213 OR2L3Q8NG85 312 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 OR6C4Q8NGE1 309 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 OR1J4Q8NGS1 313 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 SDR39U1Q9NRG7 319 aaPredicted RBP6.8□□□□□ -1.32
SMC1A-201ENST00000322213 NAALAD2Q9Y3Q0 740 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 ENDOD1O94919 500 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 SOX30O94993 753 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 PBX3P40426 434 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 PPIGQ13427 754 aaKnown RBP eCLIP6.8□□□□□ -1.32
SMC1A-201ENST00000322213 CRY2Q49AN0 593 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 RPL13AP3Q6NVV1 102 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 BRINP3Q76B58 766 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 PIWIL3Q7Z3Z3 882 aaKnown RBP6.8□□□□□ -1.32
SMC1A-201ENST00000322213 ENTHD1Q8IYW4 607 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 ADGRG2Q8IZP9 1017 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 RNF31Q96EP0 1072 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 ELMOD3Q96FG2 381 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 C7orf50Q9BRJ6 194 aaKnown RBP6.8□□□□□ -1.32
SMC1A-201ENST00000322213 GORASP2Q9H8Y8 452 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 NEMP2A6NFY4 417 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms