RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 TAS2R41P59536 307 aa14.66□□□□□ -0.06
VARS2-201ENST00000321897 CREMQ03060 361 aa14.66□□□□□ -0.06
VARS2-201ENST00000321897 DSC1Q08554 894 aa14.66□□□□□ -0.06
VARS2-201ENST00000321897 ABHD18Q0P651 414 aa14.66□□□□□ -0.06
VARS2-201ENST00000321897 DUOXA1Q1HG43 343 aa14.66□□□□□ -0.06
VARS2-201ENST00000321897 TUBA3EQ6PEY2 450 aa14.66□□□□□ -0.06
VARS2-201ENST00000321897 IRF7Q92985 503 aa14.66□□□□□ -0.06
VARS2-201ENST00000321897 FEVQ99581 238 aa14.66□□□□□ -0.06
VARS2-201ENST00000321897 TMEM121BQ9BXQ6 578 aaPredicted RBP14.66□□□□□ -0.06
VARS2-201ENST00000321897 RABL2AQ9UBK7 228 aaPredicted RBP14.66□□□□□ -0.06
VARS2-201ENST00000321897 IL20RAQ9UHF4 553 aa14.66□□□□□ -0.06
VARS2-201ENST00000321897 DRGXA6NNA5 263 aa14.66□□□□□ -0.06
VARS2-201ENST00000321897 PLD2O14939 933 aa14.66□□□□□ -0.06
VARS2-201ENST00000321897 UGT2B17O75795 530 aa14.66□□□□□ -0.06
VARS2-201ENST00000321897 PTTG1O95997 202 aa14.66□□□□□ -0.06
VARS2-201ENST00000321897 FGF4P08620 206 aa14.66□□□□□ -0.06
VARS2-201ENST00000321897 HLA-FP30511 346 aa14.66□□□□□ -0.06
VARS2-201ENST00000321897 ASMTP46597 345 aa14.66□□□□□ -0.06
VARS2-201ENST00000321897 E2F2Q14209 437 aa14.66□□□□□ -0.06
VARS2-201ENST00000321897 PAMR1Q6UXH9 720 aa14.66□□□□□ -0.06
VARS2-201ENST00000321897 BHLHA9Q7RTU4 235 aa14.66□□□□□ -0.06
VARS2-201ENST00000321897 AMZ2Q86W34 360 aa14.66□□□□□ -0.06
VARS2-201ENST00000321897 DEDD2Q8WXF8 326 aa14.66□□□□□ -0.06
VARS2-201ENST00000321897 CXorf40BQ96DE9 158 aa14.66□□□□□ -0.06
VARS2-201ENST00000321897 AIF1LQ9BQI0 150 aa14.66□□□□□ -0.06
VARS2-201ENST00000321897 BRINP2Q9C0B6 783 aa14.66□□□□□ -0.06
VARS2-201ENST00000321897 PPIL3Q9H2H8 161 aaKnown RBP14.66□□□□□ -0.06
VARS2-201ENST00000321897 TMEM138Q9NPI0 162 aa14.66□□□□□ -0.06
VARS2-201ENST00000321897 ENOPH1Q9UHY7 261 aa14.66□□□□□ -0.06
VARS2-201ENST00000321897 DNAH12Q6ZR08 3092 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 ZNF860A6NHJ4 632 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 SLC30A4O14863 429 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 ADH1CP00326 375 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 RHOP08100 348 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 GGT1P19440 569 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 CD72P21854 359 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 CSTF2P33240 577 aaKnown RBP eCLIP14.65□□□□□ -0.06
VARS2-201ENST00000321897 SDC2P34741 201 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 CDK6Q00534 326 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 RPA4Q13156 261 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 OOSP2Q86WS3 158 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 VRK3Q8IV63 474 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 ZNF431Q8TF32 576 aaPredicted RBP14.65□□□□□ -0.06
VARS2-201ENST00000321897 LINC01599Q8WXQ3 324 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 C17orf62Q9BQA9 187 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 ADAP2Q9NPF8 381 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 NFKBIL1Q9UBC1 381 aaPredicted RBP14.65□□□□□ -0.06
VARS2-201ENST00000321897 NME6O75414 186 aaPredicted RBP14.65□□□□□ -0.06
VARS2-201ENST00000321897 CLTBP09497 229 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 HPGDP15428 266 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 ARL4DP49703 201 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 IDNKQ5T6J7 187 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 VITQ6UXI7 678 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 ZNF551Q7Z340 670 aaPredicted RBP14.65□□□□□ -0.06
VARS2-201ENST00000321897 SPRED1Q7Z699 444 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 B3GNT8Q7Z7M8 397 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 IQCHQ86VS3 1027 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 AQP11Q8NBQ7 271 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 OR7G1Q8NGA0 311 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 HUS1BQ8NHY5 278 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 BCL7CQ8WUZ0 217 aaPredicted RBP14.65□□□□□ -0.06
VARS2-201ENST00000321897 SMURF1Q9HCE7 757 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 PLSCR3Q9NRY6 295 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 IL36AQ9UHA7 158 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 OARD1Q9Y530 152 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 NUDT14O95848 222 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 BMP1P13497 986 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 ITGA2P17301 1181 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 MAGEA12P43365 314 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 MAB21L1Q13394 359 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 LASP1Q14847 261 aaKnown RBP14.65□□□□□ -0.06
VARS2-201ENST00000321897 DCST1Q5T197 706 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 MZT2AQ6P582 158 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 NPAS3Q8IXF0 933 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 PRSS58Q8IYP2 241 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 AKAP1Q92667 903 aaKnown RBP eCLIP14.65□□□□□ -0.06
VARS2-201ENST00000321897 TIFAQ96CG3 184 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 F2RL3Q96RI0 385 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 SLC46A2Q9BY10 475 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 BAIAP2Q9UQB8 552 aa14.65□□□□□ -0.06
VARS2-201ENST00000321897 AP2S1P53680 142 aaPredicted RBP14.64□□□□□ -0.07
VARS2-201ENST00000321897 TRIM71Q2Q1W2 868 aaKnown RBP14.64□□□□□ -0.07
VARS2-201ENST00000321897 FYTTD1Q96QD9 318 aaKnown RBP14.64□□□□□ -0.07
VARS2-201ENST00000321897 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.64□□□□□ -0.07
VARS2-201ENST00000321897 RIMKLBQ9ULI2 386 aa14.64□□□□□ -0.07
VARS2-201ENST00000321897 MEIOCA2RUB1 952 aa14.64□□□□□ -0.07
VARS2-201ENST00000321897 CCNDBP1O95273 360 aa14.64□□□□□ -0.07
VARS2-201ENST00000321897 SDC1P18827 310 aa14.64□□□□□ -0.07
VARS2-201ENST00000321897 CDKN2CP42773 168 aa14.64□□□□□ -0.07
VARS2-201ENST00000321897 HYAL2Q12891 473 aa14.64□□□□□ -0.07
VARS2-201ENST00000321897 VMACQ2NL98 169 aa14.64□□□□□ -0.07
VARS2-201ENST00000321897 CCSMST1Q4G0I0 132 aa14.64□□□□□ -0.07
VARS2-201ENST00000321897 C22orf42Q6IC83 251 aa14.64□□□□□ -0.07
VARS2-201ENST00000321897 TMIGD1Q6UXZ0 262 aa14.64□□□□□ -0.07
VARS2-201ENST00000321897 HSD11B1LQ7Z5J1 315 aa14.64□□□□□ -0.07
VARS2-201ENST00000321897 METTL3Q86U44 580 aaKnown RBP14.64□□□□□ -0.07
VARS2-201ENST00000321897 LYSMD2Q8IV50 215 aa14.64□□□□□ -0.07
VARS2-201ENST00000321897 RDH12Q96NR8 316 aa14.64□□□□□ -0.07
VARS2-201ENST00000321897 TAF1LQ8IZX4 1826 aa14.64□□□□□ -0.07
VARS2-201ENST00000321897 A0A1W2PRG6 482 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms