RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 NPLQ9BXD5 320 aaPredicted RBP8.5□□□□□ -1.05
SSBP2-201ENST00000320672 SYNPO2LQ9H987 977 aa8.5□□□□□ -1.05
SSBP2-201ENST00000320672 A6NLC8 198 aa8.5□□□□□ -1.05
SSBP2-201ENST00000320672 GPIP06744 558 aa8.5□□□□□ -1.05
SSBP2-201ENST00000320672 XIAPP98170 497 aa8.5□□□□□ -1.05
SSBP2-201ENST00000320672 SPRED3Q2MJR0 410 aa8.5□□□□□ -1.05
SSBP2-201ENST00000320672 TYSND1Q2T9J0 566 aa8.5□□□□□ -1.05
SSBP2-201ENST00000320672 SLC25A25Q6KCM7 469 aa8.5□□□□□ -1.05
SSBP2-201ENST00000320672 POLDIP3Q9BY77 421 aaKnown RBP8.5□□□□□ -1.05
SSBP2-201ENST00000320672 SPATA6Q9NWH7 488 aaPredicted RBP8.5□□□□□ -1.05
SSBP2-201ENST00000320672 CBFA2T3O75081 653 aa8.5□□□□□ -1.05
SSBP2-201ENST00000320672 PVRP15151 417 aa8.5□□□□□ -1.05
SSBP2-201ENST00000320672 MLLT6P55198 1093 aaPredicted RBP8.5□□□□□ -1.05
SSBP2-201ENST00000320672 ZNF791Q3KP31 576 aaPredicted RBP8.5□□□□□ -1.05
SSBP2-201ENST00000320672 C6orf132Q5T0Z8 1188 aa8.5□□□□□ -1.05
SSBP2-201ENST00000320672 WASH2PQ6VEQ5 465 aa8.5□□□□□ -1.05
SSBP2-201ENST00000320672 PIWIL3Q7Z3Z3 882 aaKnown RBP8.5□□□□□ -1.05
SSBP2-201ENST00000320672 CILP2Q8IUL8 1156 aa8.5□□□□□ -1.05
SSBP2-201ENST00000320672 FRS2Q8WU20 508 aa8.5□□□□□ -1.05
SSBP2-201ENST00000320672 MRGPRX2Q96LB1 330 aa8.5□□□□□ -1.05
SSBP2-201ENST00000320672 PRDM9Q9NQV7 894 aa8.5□□□□□ -1.05
SSBP2-201ENST00000320672 WDR45Q9Y484 360 aa8.5□□□□□ -1.05
SSBP2-201ENST00000320672 RNGTTO60942 597 aaKnown RBP8.5□□□□□ -1.05
SSBP2-201ENST00000320672 APLP1P51693 650 aa8.5□□□□□ -1.05
SSBP2-201ENST00000320672 CRYZQ08257 329 aaKnown RBP8.5□□□□□ -1.05
SSBP2-201ENST00000320672 SNTA1Q13424 505 aa8.5□□□□□ -1.05
SSBP2-201ENST00000320672 ZNF765Q7L2R6 523 aa8.5□□□□□ -1.05
SSBP2-201ENST00000320672 CMASQ8NFW8 434 aaPredicted RBP8.5□□□□□ -1.05
SSBP2-201ENST00000320672 OR5D16Q8NGK9 328 aa8.5□□□□□ -1.05
SSBP2-201ENST00000320672 ENAMQ9NRM1 1142 aa8.5□□□□□ -1.05
SSBP2-201ENST00000320672 H3BML4 177 aa8.5□□□□□ -1.05
SSBP2-201ENST00000320672 CFL1P23528 166 aaKnown RBP8.5□□□□□ -1.05
SSBP2-201ENST00000320672 AK4P27144 223 aaPredicted RBP8.5□□□□□ -1.05
SSBP2-201ENST00000320672 SFTPDP35247 375 aa8.5□□□□□ -1.05
SSBP2-201ENST00000320672 PSMA6P60900 246 aaKnown RBP8.5□□□□□ -1.05
SSBP2-201ENST00000320672 FLYWCH1Q4VC44 716 aa8.5□□□□□ -1.05
SSBP2-201ENST00000320672 SRFBP1Q8NEF9 429 aaKnown RBP8.5□□□□□ -1.05
SSBP2-201ENST00000320672 PEX13Q92968 403 aa8.5□□□□□ -1.05
SSBP2-201ENST00000320672 EEF1E1-BLOC1S5C9J1V9 151 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 G3V3Y1 287 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 EDN1P05305 212 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 RPS3P23396 243 aaKnown RBP eCLIP8.49□□□□□ -1.05
SSBP2-201ENST00000320672 ARRB1P49407 418 aaPredicted RBP8.49□□□□□ -1.05
SSBP2-201ENST00000320672 CLRN1P58418 232 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 ARPC4P59998 168 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 ATAD3CQ5T2N8 411 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 OR2T5Q6IEZ7 315 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 OR2T29Q8NH02 315 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 CMTM7Q96FZ5 175 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 HSPA12BQ96MM6 686 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 CD244Q9BZW8 370 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 RNF38Q9H0F5 515 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 ATG5Q9H1Y0 275 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 SPATA7Q9P0W8 599 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 TEX264Q9Y6I9 313 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 ADAP00813 363 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 OGNP20774 298 aaKnown RBP8.49□□□□□ -1.05
SSBP2-201ENST00000320672 PSMB5P28074 263 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 DNAJA1P31689 397 aaKnown RBP8.49□□□□□ -1.05
SSBP2-201ENST00000320672 TPRG1Q6ZUI0 275 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 USP43Q70EL4 1123 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 APLFQ8IW19 511 aaPredicted RBP8.49□□□□□ -1.05
SSBP2-201ENST00000320672 NPWQ8N729 165 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 OR4K13Q8NH42 304 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 APIPQ96GX9 242 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 SIGLEC10Q96LC7 697 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 RPF2Q9H7B2 306 aaKnown RBP8.49□□□□□ -1.05
SSBP2-201ENST00000320672 NUFIP1Q9UHK0 495 aaKnown RBP8.49□□□□□ -1.05
SSBP2-201ENST00000320672 ROBO3Q96MS0 1386 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 PLOD2O00469 737 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 CAPNS1P04632 268 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 GYPBP06028 91 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 C6P13671 934 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 GNSP15586 552 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 LEPRP48357 1165 aaKnown RBP8.49□□□□□ -1.05
SSBP2-201ENST00000320672 LSSP48449 732 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 SHC2P98077 582 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 ABHD18Q0P651 414 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 GRIK2Q13002 908 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 CES4AQ5XG92 561 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 TMEM110Q86TL2 294 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 NUDT22Q9BRQ3 303 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 RCOR3Q9P2K3 495 aaPredicted RBP8.49□□□□□ -1.05
SSBP2-201ENST00000320672 B3GALT1Q9Y5Z6 326 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 IQCF3P0C7M6 154 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 TMEM11P17152 192 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 AGXTP21549 392 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 DRD5P21918 477 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 MAD2L1BPQ15013 274 aaPredicted RBP8.49□□□□□ -1.05
SSBP2-201ENST00000320672 HES5Q5TA89 166 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 RAET1LQ5VY80 246 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 NANOGP8Q6NSW7 305 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 EPGNQ6UW88 154 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 IL22RA1Q8N6P7 574 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 ZNF548Q8NEK5 533 aaPredicted RBP8.49□□□□□ -1.05
SSBP2-201ENST00000320672 DDX1Q92499 740 aaKnown RBP8.49□□□□□ -1.05
SSBP2-201ENST00000320672 ITPAQ9BY32 194 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 ANKRA2Q9H9E1 313 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 NANOGQ9H9S0 305 aa8.49□□□□□ -1.05
SSBP2-201ENST00000320672 SRRDQ9UH36 339 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms