RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 C2orf76Q3KRA6 126 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 ITPRIPL2Q3MIP1 535 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 KBTBD12Q3ZCT8 623 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 C11orf63Q6NUN7 778 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 LINGO4Q6UY18 593 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 IL17RELQ6ZVW7 336 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 CREB3L2Q70SY1 520 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 ANO5Q75V66 913 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 C1QL2Q7Z5L3 287 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 RTN4RL2Q86UN3 420 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 VPS36Q86VN1 386 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 CLYBLQ8N0X4 340 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 PDCL2Q8N4E4 241 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 KLHDC1Q8N7A1 406 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 CEP112Q8N8E3 955 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 OR4K1Q8NGD4 311 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 KIFAP3Q92845 792 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 WBP2Q969T9 261 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 CENPTQ96BT3 561 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 PHF21BQ96EK2 531 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 SGF29Q96ES7 293 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 CEP170P1Q96L14 293 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 PANX3Q96QZ0 392 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 MYADMQ96S97 322 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 NTPCRQ9BSD7 190 aaKnown RBP3.72□□□□□ -1.81
SMCO3-201ENST00000316048 C1QTNF7Q9BXJ2 289 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 TRIM7Q9C029 511 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 UBTD1Q9HAC8 227 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 NRBP2Q9NSY0 501 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 AIPL1Q9NZN9 384 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 FBXL5Q9UKA1 691 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 GUCA1BQ9UMX6 200 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 ASTN1O14525 1302 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 PHIPQ8WWQ0 1821 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 SSC5DA1L4H1 1573 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 LOXHD1Q8IVV2 1947 aa3.72□□□□□ -1.81
SMCO3-201ENST00000316048 CCDC169A6NNP5 214 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 MAPK13O15264 365 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 N4BP1O75113 896 aaKnown RBP3.71□□□□□ -1.81
SMCO3-201ENST00000316048 LCA5LO95447 670 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 STAG3L1P0CL83 205 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 NR1D1P20393 614 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 CASP3P42574 277 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 MAGEA1P43355 309 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 MAGEB1P43366 347 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 CASP4P49662 377 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 PDX1P52945 283 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 PEX3P56589 373 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 STX1BP61266 288 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 KLHL30Q0D2K2 578 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 NPRL3Q12980 569 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 DMP1Q13316 513 aaPredicted RBP3.71□□□□□ -1.81
SMCO3-201ENST00000316048 PPA1Q15181 289 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 TWIST1Q15672 202 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 FAM174BQ3ZCQ3 159 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 XKR3Q5GH77 459 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 SIRPB2Q5JXA9 342 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 PRAMEF8Q5VWM4 474 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 FAM166AQ6J272 317 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.71□□□□□ -1.81
SMCO3-201ENST00000316048 TRMT1LQ7Z2T5 733 aaKnown RBP3.71□□□□□ -1.81
SMCO3-201ENST00000316048 C12orf56Q8IXR9 622 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 PEX5LQ8IYB4 626 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 SLC35F6Q8N357 371 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 RNF10Q8N5U6 811 aaKnown RBP3.71□□□□□ -1.81
SMCO3-201ENST00000316048 RASGEF1AQ8N9B8 481 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 GRHL3Q8TE85 626 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 SLC35C1Q96A29 364 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 PYCR2Q96C36 320 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 OPTNQ96CV9 577 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 ABHD8Q96I13 439 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 IFT74Q96LB3 600 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 C17orf77Q96MU5 243 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 ZNF385AQ96PM9 386 aaKnown RBP3.71□□□□□ -1.81
SMCO3-201ENST00000316048 NAPGQ99747 312 aaPredicted RBP3.71□□□□□ -1.81
SMCO3-201ENST00000316048 ZNF559Q9BR84 538 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 CRACR2AQ9BSW2 395 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 P2RY12Q9H244 342 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 SLITRK6Q9H5Y7 841 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 APOBEC3GQ9HC16 384 aaKnown RBP3.71□□□□□ -1.81
SMCO3-201ENST00000316048 ZNF302Q9NR11 478 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 AGPAT3Q9NRZ7 376 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 DMAC2Q9NW81 257 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 GPR132Q9UNW8 380 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 AGTPBP1Q9UPW5 1226 aa3.71□□□□□ -1.81
SMCO3-201ENST00000316048 SBF1O95248 1867 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 RBBP6Q7Z6E9 1792 aaKnown RBP3.71□□□□□ -1.82
SMCO3-201ENST00000316048 EPHB6O15197 1021 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 PPFIA2O75334 1257 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 NOL4O94818 638 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 SBK2P0C263 348 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 IRF2P14316 349 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 UCHL3P15374 230 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 FERP16591 822 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 HLA-DPA1P20036 260 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 FBLP22087 321 aaKnown RBP3.71□□□□□ -1.82
SMCO3-201ENST00000316048 SP100P23497 879 aaPredicted RBP3.71□□□□□ -1.82
SMCO3-201ENST00000316048 ANXA13P27216 316 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 EPHA2P29317 976 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 SLC6A6P31641 620 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms