RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 HSPB3Q12988 150 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 RAB30Q15771 203 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 MEP1AQ16819 746 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 KHDRBS2Q5VWX1 349 aaKnown RBP11.85□□□□□ -0.51
RNF4-201ENST00000314289 FAM71E1Q6IPT2 247 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 TMEM53Q6P2H8 277 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 PIWIL3Q7Z3Z3 882 aaKnown RBP11.85□□□□□ -0.51
RNF4-201ENST00000314289 NFKBIDQ8NI38 313 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 SETD7Q8WTS6 366 aaKnown RBP11.85□□□□□ -0.51
RNF4-201ENST00000314289 SMPDL3AQ92484 453 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 SIPA1Q96FS4 1042 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 CAMK1GQ96NX5 476 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 FCRL4Q96PJ5 515 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 AIF1LQ9BQI0 150 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 APOOQ9BUR5 198 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 BTBD1Q9H0C5 482 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 KLHL31Q9H511 634 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 TEX10Q9NXF1 929 aaPredicted RBP11.85□□□□□ -0.51
RNF4-201ENST00000314289 PCDHGA8Q9Y5G5 932 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 PIAS3Q9Y6X2 628 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 MDC1Q14676 2089 aaKnown RBP11.85□□□□□ -0.51
RNF4-201ENST00000314289 A0A1W2PRB8 838 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 TMEM247A6NEH6 219 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 TOR1BO14657 336 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 GCM2O75603 506 aaPredicted RBP11.85□□□□□ -0.51
RNF4-201ENST00000314289 CLPXO76031 633 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 ALPPL2P10696 532 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 OPRL1P41146 370 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 CCR8P51685 355 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 MVDP53602 400 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 ANXA8L1Q5VT79 327 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 CPZQ66K79 652 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 ZNF773Q6PK81 442 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 ENPP7Q6UWV6 458 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 MSANTD1Q6ZTZ1 278 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 CYP4Z1Q86W10 505 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 SYNPOQ8N3V7 929 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 OR52E1Q8NGJ3 308 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 OR52J3Q8NH60 311 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 SPPL2AQ8TCT8 520 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 TRUB1Q8WWH5 349 aaKnown RBP11.85□□□□□ -0.51
RNF4-201ENST00000314289 ZNF717Q9BY31 904 aaPredicted RBP11.85□□□□□ -0.51
RNF4-201ENST00000314289 RAD21L1Q9H4I0 556 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 SYNPO2LQ9H987 977 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 FAM118AQ9NWS6 357 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 BTNL2Q9UIR0 455 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 RNASET2O00584 256 aaKnown RBP11.84□□□□□ -0.51
RNF4-201ENST00000314289 PLRG1O43660 514 aaKnown RBP11.84□□□□□ -0.51
RNF4-201ENST00000314289 TMPRSS11DO60235 418 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 ASGR2P07307 311 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 AGXTP21549 392 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 EPHA2P29317 976 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 PRIM2P49643 509 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 RAD23AP54725 363 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 RAB15P59190 212 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 BROXQ5VW32 411 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 GPR155Q7Z3F1 870 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 HORMAD1Q86X24 394 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.84□□□□□ -0.51
RNF4-201ENST00000314289 FBXL6Q8N531 539 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 NRBF2Q96F24 287 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 MAGED4Q96JG8 741 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 CSF3RQ99062 836 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 TMEM9Q9P0T7 183 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 RBMX2Q9Y388 322 aaKnown RBP11.84□□□□□ -0.51
RNF4-201ENST00000314289 TDRD6O60522 2096 aaKnown RBP11.84□□□□□ -0.51
RNF4-201ENST00000314289 KRBA1A5PL33 1030 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 HTR3EA5X5Y0 456 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 MAN1A2O60476 641 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 RPN2P04844 631 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 FABP3P05413 133 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 IDUAP35475 653 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 PIK3CBP42338 1070 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 DEPDC1Q5TB30 811 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 TNFAIP8L2Q6P589 184 aaPredicted RBP11.84□□□□□ -0.51
RNF4-201ENST00000314289 TMEM92Q6UXU6 159 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 USP51Q70EK9 711 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 HMGN2P46Q86SG4 172 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 LSRQ86X29 649 aaPredicted RBP11.84□□□□□ -0.51
RNF4-201ENST00000314289 ARL10Q8N8L6 244 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 OR4E2Q8NGC2 313 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 OR2A1Q8NGT9 310 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 RPLP0P6Q8NHW5 317 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 KLHL25Q9H0H3 589 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 RIBC2Q9H4K1 309 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 IL1RAPQ9NPH3 570 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 LHX9Q9NQ69 397 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 TBC1D29Q9UFV1 150 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 ATP6V1HQ9UI12 483 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 BAG5Q9UL15 447 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 PSME2Q9UL46 239 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 AP3M1Q9Y2T2 418 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 TSC22D4Q9Y3Q8 395 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 SAMHD1Q9Y3Z3 626 aaKnown RBP11.84□□□□□ -0.51
RNF4-201ENST00000314289 MUC3AQ02505 3323 aa11.84□□□□□ -0.51
RNF4-201ENST00000314289 SLC19A1P41440 591 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 TMBIM6P55061 237 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 CSNK1G2P78368 415 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 SPCS2Q15005 226 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 OR2T5Q6IEZ7 315 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms