RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 PDGFRLQ15198 375 aa13□□□□□ -0.33
CDH8-201ENST00000299345 INAQ16352 499 aa13□□□□□ -0.33
CDH8-201ENST00000299345 SLC30A8Q8IWU4 369 aa13□□□□□ -0.33
CDH8-201ENST00000299345 CPA6Q8N4T0 437 aa13□□□□□ -0.33
CDH8-201ENST00000299345 AQP11Q8NBQ7 271 aa13□□□□□ -0.33
CDH8-201ENST00000299345 GOT1L1Q8NHS2 421 aaPredicted RBP13□□□□□ -0.33
CDH8-201ENST00000299345 RAB8BQ92930 207 aa13□□□□□ -0.33
CDH8-201ENST00000299345 PCBD2Q9H0N5 130 aa13□□□□□ -0.33
CDH8-201ENST00000299345 TMEM38AQ9H6F2 299 aa13□□□□□ -0.33
CDH8-201ENST00000299345 CORINQ9Y5Q5 1042 aa13□□□□□ -0.33
CDH8-201ENST00000299345 COL4A6Q14031 1691 aa13□□□□□ -0.33
CDH8-201ENST00000299345 FEZF1A0PJY2 475 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 CAPN5O15484 640 aaPredicted RBP12.99□□□□□ -0.33
CDH8-201ENST00000299345 HSD17B2P37059 387 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 SSR2P43308 183 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 MASP1P48740 699 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 RPA4Q13156 261 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 TIGD6Q17RP2 521 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 FAM78AQ5JUQ0 283 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 TMEM236Q5W0B7 351 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 PSRC1Q6PGN9 363 aaPredicted RBP12.99□□□□□ -0.33
CDH8-201ENST00000299345 PTCHD4Q6ZW05 846 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 IGFN1Q86VF2 1251 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 MCFD2Q8NI22 146 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 VANGL1Q8TAA9 524 aaPredicted RBP12.99□□□□□ -0.33
CDH8-201ENST00000299345 SMARCD2Q92925 531 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 LINC00615Q96LM1 132 aaPredicted RBP12.99□□□□□ -0.33
CDH8-201ENST00000299345 ALPK1Q96QP1 1244 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 PITX2Q99697 317 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 RLIMQ9NVW2 624 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 C5AR2Q9P296 337 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 ENPP4Q9Y6X5 453 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 SCN8AQ9UQD0 1980 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 H3BN98 237 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 ARAFP10398 606 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 C21orf33P30042 268 aaPredicted RBP12.99□□□□□ -0.33
CDH8-201ENST00000299345 DGKEP52429 567 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 ADPRMQ3LIE5 342 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 DEF8Q6ZN54 512 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 NUDT13Q86X67 352 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 FBLIM1Q8WUP2 373 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 OR5P2Q8WZ92 322 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 RAB7BQ96AH8 199 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 RSPRY1Q96DX4 576 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 GPATCH2Q9NW75 528 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 TRIM64BA6NI03 449 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 SLC28A2O43868 658 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 OR10H3O60404 316 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 DPM1O60762 260 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 LILRB5O75023 590 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 PDE9AO76083 593 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 DBTP11182 482 aaKnown RBP12.99□□□□□ -0.33
CDH8-201ENST00000299345 ACP5P13686 325 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 ACADLP28330 430 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 GRK3P35626 688 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 P2RY2P41231 377 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 VASPP50552 380 aaPredicted RBP12.99□□□□□ -0.33
CDH8-201ENST00000299345 PRKAG1P54619 331 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 KCNC4Q03721 635 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 DCDC5Q6ZRR9 648 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 FAM124AQ86V42 546 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 XAGE5Q8WWM1 108 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 KLK6Q92876 244 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 SLC38A4Q969I6 547 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 ZBED6CLQ96FA7 236 aaPredicted RBP12.99□□□□□ -0.33
CDH8-201ENST00000299345 C12orf66Q96MD2 445 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 CHST8Q9H2A9 424 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 OR52A5Q9H2C5 316 aa12.99□□□□□ -0.33
CDH8-201ENST00000299345 DNAAF2Q9NVR5 837 aaKnown RBP12.99□□□□□ -0.33
CDH8-201ENST00000299345 CUEDC1Q9NWM3 386 aaPredicted RBP12.99□□□□□ -0.33
CDH8-201ENST00000299345 PRAMEF33A0A0G2JMD5 474 aa12.98□□□□□ -0.33
CDH8-201ENST00000299345 LINC01553A4QN01 128 aa12.98□□□□□ -0.33
CDH8-201ENST00000299345 PCDH17O14917 1159 aa12.98□□□□□ -0.33
CDH8-201ENST00000299345 PRAMEF10O60809 474 aa12.98□□□□□ -0.33
CDH8-201ENST00000299345 WBP4O75554 376 aaKnown RBP12.98□□□□□ -0.33
CDH8-201ENST00000299345 DDCP20711 480 aa12.98□□□□□ -0.33
CDH8-201ENST00000299345 PPP2R1BP30154 601 aa12.98□□□□□ -0.33
CDH8-201ENST00000299345 PDE7AQ13946 482 aa12.98□□□□□ -0.33
CDH8-201ENST00000299345 ELOAQ14241 798 aaKnown RBP12.98□□□□□ -0.33
CDH8-201ENST00000299345 TMEM52BQ4KMG9 183 aa12.98□□□□□ -0.33
CDH8-201ENST00000299345 SPRED2Q7Z698 418 aa12.98□□□□□ -0.33
CDH8-201ENST00000299345 RPL3LQ92901 407 aaKnown RBP12.98□□□□□ -0.33
CDH8-201ENST00000299345 RGMAQ96B86 450 aa12.98□□□□□ -0.33
CDH8-201ENST00000299345 ZNF707Q96C28 371 aaPredicted RBP12.98□□□□□ -0.33
CDH8-201ENST00000299345 BBS4Q96RK4 519 aa12.98□□□□□ -0.33
CDH8-201ENST00000299345 ZNF607Q96SK3 696 aa12.98□□□□□ -0.33
CDH8-201ENST00000299345 NIPSNAP1Q9BPW8 284 aa12.98□□□□□ -0.33
CDH8-201ENST00000299345 GABARAPL3Q9BY60 117 aa12.98□□□□□ -0.33
CDH8-201ENST00000299345 C6orf62Q9GZU0 229 aaPredicted RBP12.98□□□□□ -0.33
CDH8-201ENST00000299345 CXorf36Q9H7Y0 433 aa12.98□□□□□ -0.33
CDH8-201ENST00000299345 NEUROD4Q9HD90 331 aa12.98□□□□□ -0.33
CDH8-201ENST00000299345 CLN6Q9NWW5 311 aa12.98□□□□□ -0.33
CDH8-201ENST00000299345 SEC14L3Q9UDX4 400 aa12.98□□□□□ -0.33
CDH8-201ENST00000299345 ERGIC3Q9Y282 383 aa12.98□□□□□ -0.33
CDH8-201ENST00000299345 PAPLNO95428 1278 aa12.98□□□□□ -0.33
CDH8-201ENST00000299345 NR2F1P10589 423 aa12.98□□□□□ -0.33
CDH8-201ENST00000299345 RHCEP18577 417 aa12.98□□□□□ -0.33
CDH8-201ENST00000299345 TPP2P29144 1249 aaPredicted RBP12.98□□□□□ -0.33
CDH8-201ENST00000299345 IL12RB1P42701 662 aa12.98□□□□□ -0.33
CDH8-201ENST00000299345 SGCGQ13326 291 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms