RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 GLIS1Q8NBF1 620 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 FANK1Q8TC84 345 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 CACNG6Q9BXT2 260 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 MKRN2Q9H000 416 aaKnown RBP14.34□□□□□ -0.11
SCN3B-201ENST00000299333 GRHPRQ9UBQ7 328 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 MROH1Q8NDA8 1641 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 RHPN2P1A8MT19 583 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 ATP6V1G2-DDX39BF2Z307 99 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 PUS10Q3MIT2 529 aaKnown RBP14.34□□□□□ -0.11
SCN3B-201ENST00000299333 KANK2Q63ZY3 851 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 GLT8D1Q68CQ7 371 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 C3orf33Q6P1S2 294 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 FAM217AQ8IXS0 508 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 GNPDA2Q8TDQ7 276 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 FAM163AQ96GL9 167 aaPredicted RBP14.34□□□□□ -0.11
SCN3B-201ENST00000299333 CNTNAP3BQ96NU0 1288 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 HNRNPABQ99729 332 aaKnown RBP14.34□□□□□ -0.11
SCN3B-201ENST00000299333 MAN2C1Q9NTJ4 1040 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 ARHGEF28Q8N1W1 1705 aaKnown RBP14.34□□□□□ -0.11
SCN3B-201ENST00000299333 PXDNQ92626 1479 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 KRBA1A5PL33 1030 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 SLC16A8O95907 504 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 SLURP2P0DP57 97 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 IRF5Q13568 498 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 NCBP2-AS2Q69YL0 99 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 ZNF527Q8NB42 609 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 TRIB2Q92519 343 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 RPS10P5Q9NQ39 176 aa14.34□□□□□ -0.11
SCN3B-201ENST00000299333 GOSR2O14653 212 aa14.33□□□□□ -0.11
SCN3B-201ENST00000299333 ADAMTS3O15072 1205 aa14.33□□□□□ -0.11
SCN3B-201ENST00000299333 ERI3O43414 337 aaKnown RBP14.33□□□□□ -0.11
SCN3B-201ENST00000299333 CRTAPO75718 401 aaPredicted RBP14.33□□□□□ -0.11
SCN3B-201ENST00000299333 AGR2O95994 175 aa14.33□□□□□ -0.11
SCN3B-201ENST00000299333 CCL23P55773 120 aa14.33□□□□□ -0.11
SCN3B-201ENST00000299333 DAOAP59103 153 aa14.33□□□□□ -0.11
SCN3B-201ENST00000299333 DGKZQ13574 1117 aa14.33□□□□□ -0.11
SCN3B-201ENST00000299333 MFSD13AQ14CX5 517 aa14.33□□□□□ -0.11
SCN3B-201ENST00000299333 TXNRD3NBQ6F5E7 133 aa14.33□□□□□ -0.11
SCN3B-201ENST00000299333 ABHD15Q6UXT9 468 aa14.33□□□□□ -0.11
SCN3B-201ENST00000299333 TMCO2Q7Z6W1 182 aaPredicted RBP14.33□□□□□ -0.11
SCN3B-201ENST00000299333 BOLLQ8N9W6 283 aaKnown RBP14.33□□□□□ -0.11
SCN3B-201ENST00000299333 ZDHHC1Q8WTX9 485 aa14.33□□□□□ -0.11
SCN3B-201ENST00000299333 CCM2LQ9NUG4 571 aaPredicted RBP14.33□□□□□ -0.11
SCN3B-201ENST00000299333 TEX264Q9Y6I9 313 aa14.33□□□□□ -0.11
SCN3B-201ENST00000299333 DENRO43583 198 aaKnown RBP14.33□□□□□ -0.12
SCN3B-201ENST00000299333 TSPAN15O95858 294 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 FECHP22830 423 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 ATP5A1P25705 553 aaKnown RBP14.33□□□□□ -0.12
SCN3B-201ENST00000299333 GSTM2P28161 218 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 SLC6A6P31641 620 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 GRIA2P42262 883 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 GRIK5Q16478 980 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 CFAP77Q6ZQR2 320 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 OR4K3Q96R72 315 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 DPEP2Q9H4A9 486 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 PDZD7Q9H5P4 517 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 ARMC1Q9NVT9 282 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 FAM120CQ9NX05 1096 aaKnown RBP14.33□□□□□ -0.12
SCN3B-201ENST00000299333 NLGN3Q9NZ94 848 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 DEC1Q9P2X7 70 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 WASF3Q9UPY6 502 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 RNF11Q9Y3C5 154 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 H0YGN5 161 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 MBP02144 154 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 AKR1C4P17516 323 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 LMO2P25791 158 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 CTNNB1P35222 781 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 SCGB2A2Q13296 93 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 POU4F3Q15319 338 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 ZNF550Q7Z398 422 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 EFCAB11Q9BUY7 163 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 SMOXQ9NWM0 555 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 NUFIP1Q9UHK0 495 aaKnown RBP14.33□□□□□ -0.12
SCN3B-201ENST00000299333 STUB1Q9UNE7 303 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 NFS1Q9Y697 457 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 A8MUA0 341 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 KHNYNO15037 678 aaKnown RBP14.33□□□□□ -0.12
SCN3B-201ENST00000299333 CAPN15O75808 1086 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 CLCNKBP51801 687 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 FUT2Q10981 343 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 OLIG2Q13516 323 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 ZNF648Q5T619 568 aaPredicted RBP14.33□□□□□ -0.12
SCN3B-201ENST00000299333 NIPA2Q8N8Q9 360 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 POTEKPQ9BYX7 375 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 MMP28Q9H239 520 aa14.33□□□□□ -0.12
SCN3B-201ENST00000299333 YJEFN3A6XGL0 299 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 HPRP00739 348 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 RETP07949 1114 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 CBLP22681 906 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 EMX2Q04743 252 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 SIRPB2Q5JXA9 342 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 CPNE5Q9HCH3 593 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 TNS2Q63HR2 1409 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 MROH2AA6NES4 1674 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 A8MVJ9 347 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 ZBTB48P10074 688 aaPredicted RBP14.32□□□□□ -0.12
SCN3B-201ENST00000299333 DRD5P21918 477 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 CAV3P56539 151 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 TAS2R50P59544 299 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 NLRP8Q86W28 1048 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms