RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 CCNB2O95067 398 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 HSD3B1P14060 373 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 HSD3B2P26439 372 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 PRLHRP49683 370 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 COL9A2Q14055 689 aaPredicted RBP23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 DDX53Q86TM3 631 aaKnown RBP23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 CXorf36Q9H7Y0 433 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 ASAH2Q9NR71 780 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 TAS2R9Q9NYW1 312 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 GPR37L1O60883 481 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 AP2A2O94973 939 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 BCHEP06276 602 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 XCR1P46094 333 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 CSNK2BP67870 215 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 MESP2Q0VG99 397 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 TRIM60Q495X7 471 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 ZNF362Q5T0B9 420 aaPredicted RBP23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 LIPIQ6XZB0 460 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 PXYLP1Q8TE99 480 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 CNPPD1Q9BV87 410 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 EHD1Q9H4M9 534 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 ZDHHC4Q9NPG8 344 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 MIEF1Q9NQG6 463 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 ATP6V1HQ9UI12 483 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 HCN4Q9Y3Q4 1203 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 DYRK1BQ9Y463 629 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 PCYT1BQ9Y5K3 369 aaPredicted RBP23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 SNX11Q9Y5W9 270 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 PSMD11O00231 422 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 ARHGAP33O14559 1287 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 MRPS14O60783 128 aaKnown RBP23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 OXSR1O95747 527 aaPredicted RBP23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 POLR2EP19388 210 aaKnown RBP23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 NTHL1P78549 312 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 EEF1A2Q05639 463 aaKnown RBP23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 CCBE1Q6UXH8 406 aaPredicted RBP23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 GDPD3Q7L5L3 318 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 WDR37Q9Y2I8 494 aa23.29■■□□□ 1.32
SPTSSA-201ENST00000298130 RFXAPO00287 272 aa23.28■■□□□ 1.32
SPTSSA-201ENST00000298130 ENTPD6O75354 484 aa23.28■■□□□ 1.32
SPTSSA-201ENST00000298130 OPRD1P41143 372 aa23.28■■□□□ 1.32
SPTSSA-201ENST00000298130 UGT2B15P54855 530 aa23.28■■□□□ 1.32
SPTSSA-201ENST00000298130 TRIM40Q6P9F5 258 aa23.28■■□□□ 1.32
SPTSSA-201ENST00000298130 SZRD1Q7Z422 152 aa23.28■■□□□ 1.32
SPTSSA-201ENST00000298130 TECPR1Q7Z6L1 1165 aa23.28■■□□□ 1.32
SPTSSA-201ENST00000298130 UCN3Q969E3 161 aa23.28■■□□□ 1.32
SPTSSA-201ENST00000298130 SH3BP5O60239 455 aa23.28■■□□□ 1.32
SPTSSA-201ENST00000298130 SEMA7AO75326 666 aa23.28■■□□□ 1.32
SPTSSA-201ENST00000298130 GPX5O75715 221 aa23.28■■□□□ 1.32
SPTSSA-201ENST00000298130 C1GALT1C1LP0DN25 315 aa23.28■■□□□ 1.32
SPTSSA-201ENST00000298130 TAP2Q03519 686 aa23.28■■□□□ 1.32
SPTSSA-201ENST00000298130 NFE2L1Q14494 772 aa23.28■■□□□ 1.32
SPTSSA-201ENST00000298130 SEC23BQ15437 767 aa23.28■■□□□ 1.32
SPTSSA-201ENST00000298130 SSX1Q16384 188 aa23.28■■□□□ 1.32
SPTSSA-201ENST00000298130 PAQR6Q6TCH4 344 aa23.28■■□□□ 1.32
SPTSSA-201ENST00000298130 CEACAM20Q6UY09 585 aa23.28■■□□□ 1.32
SPTSSA-201ENST00000298130 DEPDC4Q8N2C3 294 aa23.28■■□□□ 1.32
SPTSSA-201ENST00000298130 SPATA9Q9BWV2 254 aa23.28■■□□□ 1.32
SPTSSA-201ENST00000298130 CEP44Q9C0F1 390 aa23.28■■□□□ 1.32
SPTSSA-201ENST00000298130 NUAK2Q9H093 628 aa23.28■■□□□ 1.32
SPTSSA-201ENST00000298130 TPK1Q9H3S4 243 aa23.28■■□□□ 1.32
SPTSSA-201ENST00000298130 SLAMF7Q9NQ25 335 aa23.28■■□□□ 1.32
SPTSSA-201ENST00000298130 TAAR2Q9P1P5 351 aa23.28■■□□□ 1.32
SPTSSA-201ENST00000298130 A0A0G2JN53 185 aa23.27■■□□□ 1.32
SPTSSA-201ENST00000298130 PNMA8CA0A1B0GUJ8 204 aa23.27■■□□□ 1.32
SPTSSA-201ENST00000298130 ANKDD1BA6NHY2 528 aa23.27■■□□□ 1.32
SPTSSA-201ENST00000298130 RGS5O15539 181 aa23.27■■□□□ 1.32
SPTSSA-201ENST00000298130 SYN1P17600 705 aa23.27■■□□□ 1.32
SPTSSA-201ENST00000298130 LSM11P83369 360 aaKnown RBP eCLIP23.27■■□□□ 1.32
SPTSSA-201ENST00000298130 SF3B4Q15427 424 aaKnown RBP eCLIP23.27■■□□□ 1.32
SPTSSA-201ENST00000298130 PARS2Q7L3T8 475 aaKnown RBP23.27■■□□□ 1.32
SPTSSA-201ENST00000298130 MEX3DQ86XN8 651 aaKnown RBP23.27■■□□□ 1.32
SPTSSA-201ENST00000298130 KREMEN2Q8NCW0 462 aa23.27■■□□□ 1.32
SPTSSA-201ENST00000298130 KBTBD8Q8NFY9 601 aa23.27■■□□□ 1.32
SPTSSA-201ENST00000298130 GEMIN6Q8WXD5 167 aaKnown RBP23.27■■□□□ 1.32
SPTSSA-201ENST00000298130 PCDHGB6Q9Y5F9 930 aa23.27■■□□□ 1.32
SPTSSA-201ENST00000298130 PLXND1Q9Y4D7 1925 aa23.27■■□□□ 1.32
SPTSSA-201ENST00000298130 SMIM30A4D0T7 59 aa23.27■■□□□ 1.32
SPTSSA-201ENST00000298130 WASHC1A8K0Z3 465 aa23.27■■□□□ 1.32
SPTSSA-201ENST00000298130 DPM1O60762 260 aa23.27■■□□□ 1.32
SPTSSA-201ENST00000298130 STATHP02808 62 aa23.27■■□□□ 1.32
SPTSSA-201ENST00000298130 AZGP1P25311 298 aaKnown RBP23.27■■□□□ 1.32
SPTSSA-201ENST00000298130 CDC42P60953 191 aa23.27■■□□□ 1.32
SPTSSA-201ENST00000298130 HSPB3Q12988 150 aa23.27■■□□□ 1.32
SPTSSA-201ENST00000298130 FAM71E1Q6IPT2 247 aa23.27■■□□□ 1.32
SPTSSA-201ENST00000298130 WASH2PQ6VEQ5 465 aa23.27■■□□□ 1.32
SPTSSA-201ENST00000298130 HORMAD2Q8N7B1 307 aa23.27■■□□□ 1.32
SPTSSA-201ENST00000298130 DENND6BQ8NEG7 585 aa23.27■■□□□ 1.32
SPTSSA-201ENST00000298130 MRGPRX3Q96LB0 322 aa23.27■■□□□ 1.32
SPTSSA-201ENST00000298130 CTPS2Q9NRF8 586 aa23.27■■□□□ 1.32
SPTSSA-201ENST00000298130 IL36AQ9UHA7 158 aa23.27■■□□□ 1.32
SPTSSA-201ENST00000298130 H3BN98 237 aa23.26■■□□□ 1.31
SPTSSA-201ENST00000298130 KMOO15229 486 aa23.26■■□□□ 1.31
SPTSSA-201ENST00000298130 FRMPD2BQ6IN97 320 aa23.26■■□□□ 1.31
SPTSSA-201ENST00000298130 DEF8Q6ZN54 512 aa23.26■■□□□ 1.31
SPTSSA-201ENST00000298130 AKAP14Q86UN6 197 aa23.26■■□□□ 1.31
SPTSSA-201ENST00000298130 C11orf74Q86VG3 221 aa23.26■■□□□ 1.31
SPTSSA-201ENST00000298130 SPHK2Q9NRA0 654 aa23.26■■□□□ 1.31
SPTSSA-201ENST00000298130 EHD3Q9NZN3 535 aa23.26■■□□□ 1.31
SPTSSA-201ENST00000298130 ENPP4Q9Y6X5 453 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms