RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 MYEOVQ96EZ4 313 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 TOE1Q96GM8 510 aaKnown RBP12.3□□□□□ -0.44
HERC6-202ENST00000273960 LINC00052Q96N35 136 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 TMED9Q9BVK6 235 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 SAP130Q9H0E3 1048 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 TPT1P8Q9HAU6 139 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 C3orf14Q9HBI5 128 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 TVP23BQ9NYZ1 205 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 FGF10O15520 208 aaPredicted RBP12.3□□□□□ -0.44
HERC6-202ENST00000273960 TAPBPO15533 448 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 LAMP1P11279 417 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 CXCL3P19876 107 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 ITGALP20701 1170 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 LHX1P48742 406 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 ATP13A5Q4VNC0 1218 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 CALHM3Q86XJ0 350 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 PTOV1Q86YD1 416 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 GPR150Q8NGU9 434 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 LKAAEAR1Q8TD35 194 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 DNAJA4Q8WW22 397 aaPredicted RBP12.3□□□□□ -0.44
HERC6-202ENST00000273960 ST8SIA4Q92187 359 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 ATG10Q9H0Y0 220 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 ANKRA2Q9H9E1 313 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 NUDT15Q9NV35 164 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 TXNL4BQ9NX01 149 aaKnown RBP12.3□□□□□ -0.44
HERC6-202ENST00000273960 TRAPPC4Q9Y296 219 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 NCKAP1Q9Y2A7 1128 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 SNX11Q9Y5W9 270 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 XIRP2A4UGR9 3374 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 C2orf81A6NN90 581 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 CHURC1-FNTBB4DL54 471 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 B4GALT3O60512 393 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 ETFAP13804 333 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 SDC1P18827 310 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 PTNP21246 168 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 CRYBB2P43320 205 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 ITGA1P56199 1179 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 RPS25P62851 125 aaKnown RBP12.29□□□□□ -0.44
HERC6-202ENST00000273960 MFSD13AQ14CX5 517 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 KLHL12Q53G59 568 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 KIF18BQ86Y91 864 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 OR4K1Q8NGD4 311 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 CRELD1Q96HD1 420 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 NELL2Q99435 816 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 PITX2Q99697 317 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 RETREG1Q9H6L5 497 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 DERAQ9Y315 318 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 MAP4K5Q9Y4K4 846 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 PCDHGA2Q9Y5H1 932 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 A0A075B6Q4 140 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 A0A0A6YYJ9 748 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 BNIP3LO60238 219 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 RGS11O94810 467 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 EPB42P16452 691 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 ZNF30P17039 623 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 WARSP23381 471 aaKnown RBP12.29□□□□□ -0.44
HERC6-202ENST00000273960 MBTPS1Q14703 1052 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 C17orf99Q6UX52 265 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 RASSF6Q6ZTQ3 369 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 LRRTM3Q86VH5 581 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 CREB3L4Q8TEY5 395 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 HYLS1Q96M11 299 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 NIPAL2Q9H841 368 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 GPBP1L1Q9HC44 474 aaPredicted RBP12.29□□□□□ -0.44
HERC6-202ENST00000273960 NDUFAF4Q9P032 175 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 MAPRE3Q9UPY8 281 aa12.29□□□□□ -0.44
HERC6-202ENST00000273960 C2orf78A6NCI8 922 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 SYN3O14994 580 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 YY2O15391 372 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 SREBF2Q12772 1141 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 TNK1Q13470 666 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 GLYR1Q49A26 553 aaPredicted RBP12.28□□□□□ -0.44
HERC6-202ENST00000273960 CLVS2Q5SYC1 327 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 FAM92BQ6ZTR7 304 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 DEFB128Q7Z7B8 93 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 ZNF280BQ86YH2 543 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 ZNF655Q8N720 491 aaPredicted RBP12.28□□□□□ -0.44
HERC6-202ENST00000273960 SLC28A3Q9HAS3 691 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 PAK6Q9NQU5 681 aaPredicted RBP12.28□□□□□ -0.44
HERC6-202ENST00000273960 KLHL21Q9UJP4 597 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 LRFN2Q9ULH4 789 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 LCTP09848 1927 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 TEX51A0A1B0GUA7 166 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 HHLA1C9JL84 531 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 PITPNM1O00562 1244 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 TLX2O43763 284 aaPredicted RBP12.28□□□□□ -0.44
HERC6-202ENST00000273960 SH3BP5O60239 455 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 SLC25A14O95258 325 aaPredicted RBP12.28□□□□□ -0.44
HERC6-202ENST00000273960 GASTP01350 101 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 AGFG1P52594 562 aaKnown RBP12.28□□□□□ -0.44
HERC6-202ENST00000273960 CSNK2BP67870 215 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 KCNJ10P78508 379 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 HTRA3P83110 453 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 FGL2Q14314 439 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 FBXL22Q6P050 247 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 ZNF852Q6ZMS4 543 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 C17orf107Q6ZR85 190 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 TOP6BLQ8N6T0 577 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 SLC9A6Q92581 669 aa12.28□□□□□ -0.44
HERC6-202ENST00000273960 RADILQ96JH8 1075 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms