RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 POLR2EP19388 210 aaKnown RBP11.89□□□□□ -0.51
BEST3-201ENST00000266661 CHMP24386 653 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 CASP9P55211 416 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 CDK6Q00534 326 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 SPIBQ01892 262 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 SLBPQ14493 270 aaKnown RBP eCLIP11.89□□□□□ -0.51
BEST3-201ENST00000266661 ZNF697Q5TEC3 545 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 UNC5DQ6UXZ4 953 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 CCDC149Q6ZUS6 474 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 NCCRP1Q6ZVX7 275 aaPredicted RBP11.89□□□□□ -0.51
BEST3-201ENST00000266661 VN1R5Q7Z5H4 357 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 ARMC8Q8IUR7 673 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 DEFB123Q8N688 67 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 VN1R2Q8NFZ6 395 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 OR9Q2Q8NGE9 314 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 SPPL3Q8TCT6 385 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 POF1BQ8WVV4 589 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 SORCS1Q8WY21 1168 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 TCEAL4Q96EI5 215 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 CRELD1Q96HD1 420 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 PIP5K1AQ99755 562 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 CORO1BQ9BR76 489 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 WRAP53Q9BUR4 548 aaKnown RBP11.89□□□□□ -0.51
BEST3-201ENST00000266661 MTG2Q9H4K7 406 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 CPNE5Q9HCH3 593 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 TAS2R9Q9NYW1 312 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 MARK1Q9P0L2 795 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 ACSL6Q9UKU0 697 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 ICKQ9UPZ9 632 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 HCN4Q9Y3Q4 1203 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 ENPP4Q9Y6X5 453 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 RPLP0P05388 317 aaKnown RBP11.89□□□□□ -0.51
BEST3-201ENST00000266661 ITGA2P17301 1181 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 RPL3P39023 403 aaKnown RBP11.89□□□□□ -0.51
BEST3-201ENST00000266661 ETV6P41212 452 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 RECQLP46063 649 aaPredicted RBP11.89□□□□□ -0.51
BEST3-201ENST00000266661 GSSP48637 474 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 RGS6P49758 472 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 CLK1P49759 484 aaKnown RBP11.89□□□□□ -0.51
BEST3-201ENST00000266661 NUDT6P53370 316 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 TAP2Q03519 686 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 PRKCDQ05655 676 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 C2orf80Q0P641 193 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 ZNF181Q2M3W8 571 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 LY6G5CQ5SRR4 150 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 ATCAYQ86WG3 371 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 ZNF557Q8N988 423 aaPredicted RBP11.89□□□□□ -0.51
BEST3-201ENST00000266661 KREMEN2Q8NCW0 462 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 OR52J3Q8NH60 311 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 CYB5D2Q8WUJ1 264 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 GEMIN6Q8WXD5 167 aaKnown RBP11.89□□□□□ -0.51
BEST3-201ENST00000266661 PPCDCQ96CD2 204 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 LRIG1Q96JA1 1093 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 TCF25Q9BQ70 676 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 OR51E2Q9H255 320 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 OR51B5Q9H339 312 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 FZD3Q9NPG1 666 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 POLE4Q9NR33 117 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 HCFC1R1Q9NWW0 138 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 IL36AQ9UHA7 158 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 WDR37Q9Y2I8 494 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 A0A0C4DFX4 3053 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 SH3D21A4FU49 640 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 SAGE2PA6NJ88 616 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 H3BM21 787 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 PSMD11O00231 422 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 FFAR1O14842 300 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 TBX6O95947 436 aaPredicted RBP11.88□□□□□ -0.51
BEST3-201ENST00000266661 TGFB1P01137 390 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 GBAP04062 536 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 CA8P35219 290 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 PIK3CBP42338 1070 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 ST3GAL4Q11206 333 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 SELENBP1Q13228 472 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 PUM1Q14671 1186 aaKnown RBP eCLIP11.88□□□□□ -0.51
BEST3-201ENST00000266661 PTGES3Q15185 160 aaKnown RBP11.88□□□□□ -0.51
BEST3-201ENST00000266661 ZNF77Q15935 545 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 SOWAHCQ53LP3 525 aaPredicted RBP11.88□□□□□ -0.51
BEST3-201ENST00000266661 ARMCX4Q5H9R4 360 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 COLEC12Q5KU26 742 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 IER5LQ5T953 404 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 PNCKQ6P2M8 343 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 TRIM40Q6P9F5 258 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 NXPE4Q6UWF7 544 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 RNF130Q86XS8 419 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 LMNTD1Q8N9Z9 388 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 OR9A1PQ8NGU1 263 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 AP2M1Q96CW1 435 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 DTD2Q96FN9 168 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 PDXPQ96GD0 296 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 FOPNLQ96NB1 174 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 GUCD1Q96NT3 240 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 MAPKAP1Q9BPZ7 522 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 TAPBPLQ9BX59 468 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 TMEM121BQ9BXQ6 578 aaPredicted RBP11.88□□□□□ -0.51
BEST3-201ENST00000266661 RNF167Q9H6Y7 350 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 TRIM39Q9HCM9 518 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 ASAH2Q9NR71 780 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 CNOT2Q9NZN8 540 aaKnown RBP11.88□□□□□ -0.51
BEST3-201ENST00000266661 NDOR1Q9UHB4 597 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms