RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 TMEM25Q86YD3 366 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 GPR65Q8IYL9 337 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 ZNF740Q8NDX6 193 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 WDR48Q8TAF3 677 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 WDR20Q8TBZ3 569 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 POP5Q969H6 163 aaKnown RBP13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 CPNE5Q9HCH3 593 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 CTPS2Q9NRF8 586 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 TRBC2A0A5B9 178 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 APOL3O95236 402 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 EFEMP2O95967 443 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 TEAD4Q15561 434 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 MICAQ29983 383 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 MPPE1Q53F39 396 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 RPS26P11Q5JNZ5 115 aaPredicted RBP13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 CFAP206Q8IYR0 622 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 DEPDC4Q8N2C3 294 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 POFUT2Q9Y2G5 429 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 PRAMEF25A6NGN4 478 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 ANKDD1BA6NHY2 528 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 AP3D1O14617 1153 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 POP4O95707 220 aaKnown RBP13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 ASMTP46597 345 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 CSNK2BP67870 215 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 SLBPQ14493 270 aaKnown RBP eCLIP13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 DUSP7Q16829 419 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 ZNF181Q2M3W8 571 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 LRIT3Q3SXY7 679 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 TPGS2Q68CL5 300 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 TCEAL8Q8IYN2 117 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 CELF5Q8N6W0 485 aaKnown RBP13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 RAB8BQ92930 207 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 FOPNLQ96NB1 174 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 WRAP53Q9BUR4 548 aaKnown RBP13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 TP63Q9H3D4 680 aaPredicted RBP13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 TIGARQ9NQ88 270 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 C5AR2Q9P296 337 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 BOLA1Q9Y3E2 137 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 PCDHGA2Q9Y5H1 932 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 ANTXRLA6NF34 631 aa13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 GASTP01350 101 aa13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 SEMG1P04279 462 aa13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 UGT2B15P54855 530 aa13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 DMPKQ09013 629 aa13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 ARSIQ5FYB1 569 aa13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 PLEKHS1Q5SXH7 462 aa13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 ARMC4Q5T2S8 1044 aa13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 IL21Q9HBE4 155 aa13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 NEK6Q9HC98 313 aa13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 MIEF1Q9NQG6 463 aa13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 ZNF282Q9UDV7 671 aaPredicted RBP13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 CLEC2DQ9UHP7 191 aa13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 SLC25A13Q9UJS0 675 aa13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 OR10H3O60404 316 aa13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 PRMT3O60678 531 aa13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 TNNI3P19429 210 aa13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 TIA1P31483 386 aaKnown RBP eCLIP13.84□□□□□ -0.191e-7■□□□□ 8.4
SFSWAP-201ENST00000261674 HNF4AP41235 474 aa13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 BCL7AQ4VC05 210 aa13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 MED27Q6P2C8 311 aa13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 DEF8Q6ZN54 512 aa13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 COMMD6Q7Z4G1 85 aa13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 TRMT11Q7Z4G4 463 aaKnown RBP13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 TRAPPC5Q8IUR0 188 aa13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 OTUB1Q96FW1 271 aaPredicted RBP13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 SP140LQ9H930 580 aa13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 SPATA6Q9NWH7 488 aaPredicted RBP13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 CLN6Q9NWW5 311 aa13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 MSRAQ9UJ68 235 aa13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 PEX16Q9Y5Y5 336 aa13.84□□□□□ -0.19
SFSWAP-201ENST00000261674 ATG2BQ96BY7 2078 aa13.83□□□□□ -0.19
SFSWAP-201ENST00000261674 ISPDA4D126 451 aa13.83□□□□□ -0.19
SFSWAP-201ENST00000261674 AGAP14A8MT82 685 aa13.83□□□□□ -0.19
SFSWAP-201ENST00000261674 TMEM229AB2RXF0 380 aa13.83□□□□□ -0.19
SFSWAP-201ENST00000261674 C5orf58C9J3I9 102 aa13.83□□□□□ -0.19
SFSWAP-201ENST00000261674 TAF4O00268 1085 aa13.83□□□□□ -0.19
SFSWAP-201ENST00000261674 RTCAO00442 366 aaKnown RBP13.83□□□□□ -0.19
SFSWAP-201ENST00000261674 GREM1O60565 184 aa13.83□□□□□ -0.19
SFSWAP-201ENST00000261674 CCNB2O95067 398 aa13.83□□□□□ -0.19
SFSWAP-201ENST00000261674 IMPA1P29218 277 aa13.83□□□□□ -0.19
SFSWAP-201ENST00000261674 PCGF2P35227 344 aa13.83□□□□□ -0.19
SFSWAP-201ENST00000261674 OR2B6P58173 313 aa13.83□□□□□ -0.19
SFSWAP-201ENST00000261674 PNCKQ6P2M8 343 aa13.83□□□□□ -0.19
SFSWAP-201ENST00000261674 MSANTD1Q6ZTZ1 278 aa13.83□□□□□ -0.19
SFSWAP-201ENST00000261674 GET4Q7L5D6 327 aaPredicted RBP13.83□□□□□ -0.19
SFSWAP-201ENST00000261674 SMG7Q92540 1137 aaKnown RBP13.83□□□□□ -0.19
SFSWAP-201ENST00000261674 TBC1D20Q96BZ9 403 aa13.83□□□□□ -0.19
SFSWAP-201ENST00000261674 NEDD4LQ96PU5 975 aa13.83□□□□□ -0.19
SFSWAP-201ENST00000261674 SH2B3Q9UQQ2 575 aa13.83□□□□□ -0.19
SFSWAP-201ENST00000261674 ITM2BQ9Y287 266 aa13.83□□□□□ -0.19
SFSWAP-201ENST00000261674 HCN4Q9Y3Q4 1203 aa13.83□□□□□ -0.19
SFSWAP-201ENST00000261674 WNT6Q9Y6F9 365 aa13.83□□□□□ -0.19
SFSWAP-201ENST00000261674 C1orf226A1L170 272 aa13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 TTC36A6NLP5 189 aa13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 ARHGAP33O14559 1287 aa13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 KMOO15229 486 aa13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 ADRA2AP08913 450 aa13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 ZNF8P17098 575 aaPredicted RBP13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 PPIBP23284 216 aaKnown RBP13.83□□□□□ -0.2
SFSWAP-201ENST00000261674 SLC15A1P46059 708 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms