RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 INHBAP08476 426 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 CCL4P13236 92 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 ZNF30P17039 623 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 HOXB6P17509 224 aaKnown RBP5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 RXRGP48443 463 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 PKNOX1P55347 436 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 NME5P56597 212 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 KIAA1024LP59773 190 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 SKP1P63208 163 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 GTF2H2Q13888 395 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 GPR33Q49SQ1 333 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 ATP6AP1LQ52LC2 224 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 TCTN3Q6NUS6 607 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 GTF2H2CQ6P1K8 395 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 ANKRD46Q86W74 232 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 OR1L3Q8NH93 324 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 EBPLQ9BY08 206 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 PLA2G12AQ9BZM1 189 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 INTS9Q9NV88 658 aaKnown RBP5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 ATXN7L1Q9ULK2 861 aaPredicted RBP5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 SORCS3Q9UPU3 1222 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 RAMP1O60894 148 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 GUCA1CO95843 209 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 SLC4A1P02730 911 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 ZNF7P17097 686 aaPredicted RBP5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 ATP5F1P24539 256 aaPredicted RBP5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 PEX2P28328 305 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 SLC15A1P46059 708 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 CCR3P51677 355 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 ARHGDIAP52565 204 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 IFITM3Q01628 133 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 HSPA14Q0VDF9 509 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 LCP2Q13094 533 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 APOFQ13790 326 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 NFATC4Q14934 902 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 ATG9BQ674R7 924 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 SLC16A12Q6ZSM3 486 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 C9orf40Q8IXQ3 194 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 ZBTB2Q8N680 514 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 EXD3Q8N9H8 876 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 CALML6Q8TD86 181 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 NUS1Q96E22 293 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 PAIP2Q9BPZ3 127 aaKnown RBP5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 CYP8B1Q9UNU6 501 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 IGKV1D-43A0A0B4J1Z2 117 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 A0A0G2JN53 185 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 MGAT4DA6NG13 374 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 H0YIG0 161 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 SH3BGRLO75368 114 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 PCCBP05166 539 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 ABCB1P08183 1280 aaPredicted RBP5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 SHC1P29353 583 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 CD226Q15762 336 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 ARL14Q8N4G2 192 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 TMIGD2Q96BF3 282 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 NAT9Q9BTE0 207 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 SPRTNQ9H040 489 aaPredicted RBP5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 C20orf141Q9NUB4 165 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 TEKT2Q9UIF3 430 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 C3orf80F5H4A9 247 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 PDLIM1O00151 329 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 IFRD1O00458 451 aaPredicted RBP5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 JUPP14923 745 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 KRT15P19012 456 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 STX2P32856 288 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 RPIAP49247 311 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 SERPINB8P50452 374 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 MTPNP58546 118 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 ADARB1P78563 741 aaKnown RBP5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 OCA2Q04671 838 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 EMX2Q04743 252 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 LAPTM5Q13571 262 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 ERV3-1Q14264 604 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 KRT33BQ14525 404 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 RAB30Q15771 203 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 GRHL2Q6ISB3 625 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 CEACAM20Q6UY09 585 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 BTLAQ7Z6A9 289 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 THOC6Q86W42 341 aaKnown RBP5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 CFAP206Q8IYR0 622 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 ALDH16A1Q8IZ83 802 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 STX19Q8N4C7 294 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 CATSPER1Q8NEC5 780 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 KAT2AQ92830 837 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 CABS1Q96KC9 395 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 NDUFAF4Q9P032 175 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 STOML1Q9UBI4 398 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 ZMYM5Q9UJ78 669 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 FBXL4Q9UKA2 621 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 POLR3HQ9Y535 204 aaPredicted RBP5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 FASNP49327 2511 aaKnown RBP5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 IGHV5-10-1A0A0J9YXX1 117 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 A6NHS1 94 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 NPIPB7O75200 414 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 SKAP2O75563 359 aaPredicted RBP5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 CHRM5P08912 532 aaPredicted RBP5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 CDH1P12830 882 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 RPL14P50914 215 aaKnown RBP5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 EPHB1P54762 984 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 PLEKHS1Q5SXH7 462 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms