RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 RAB43Q86YS6 212 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 L3MBTL4Q8NA19 623 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 OR52B6Q8NGF0 335 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 TGIF2Q9GZN2 237 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 AICDAQ9GZX7 198 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 SLC24A3Q9HC58 644 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 SEMA4BQ9NPR2 832 aaPredicted RBP15.86■□□□□ 0.13
SDCBP-201ENST00000260130 SCOCQ9UIL1 159 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 RNF11Q9Y3C5 154 aa15.86■□□□□ 0.13
SDCBP-201ENST00000260130 EIF4E1BA6NMX2 242 aaKnown RBP15.85■□□□□ 0.13
SDCBP-201ENST00000260130 ERVH48-1M5A8F1 160 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 SUPT7LO94864 414 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 TBX6O95947 436 aaPredicted RBP15.85■□□□□ 0.13
SDCBP-201ENST00000260130 PCNAP12004 261 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 OTX2P32243 289 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 ARL1P40616 181 aaPredicted RBP15.85■□□□□ 0.13
SDCBP-201ENST00000260130 CDH13P55290 713 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 CES4AQ5XG92 561 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 RPS27LQ71UM5 84 aaKnown RBP15.85■□□□□ 0.13
SDCBP-201ENST00000260130 PPP4R1Q8TF05 950 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 MS4A6EQ96DS6 147 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 CCDC126Q96EE4 140 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 MARCOQ9UEW3 520 aaPredicted RBP15.85■□□□□ 0.13
SDCBP-201ENST00000260130 ADGRE2Q9UHX3 823 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 MAN2B2Q9Y2E5 1009 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 G3V2L1 256 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 H0YIV9 168 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 RDH16O75452 317 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 B3GALT4O96024 378 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 SERPINB1P30740 379 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 AP2B1P63010 937 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 CPSF6Q16630 551 aaKnown RBP eCLIP15.85■□□□□ 0.13
SDCBP-201ENST00000260130 ADPRMQ3LIE5 342 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 UNC50Q53HI1 259 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 ZYG11AQ6WRX3 759 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 LAPTM4BQ86VI4 370 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 PRSS58Q8IYP2 241 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 ULK2Q8IYT8 1036 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 OR51Q1Q8NH59 317 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 APOBEC4Q8WW27 367 aaKnown RBP15.85■□□□□ 0.13
SDCBP-201ENST00000260130 NACC2Q96BF6 587 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 CDK15Q96Q40 435 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 ZNF184Q99676 751 aaPredicted RBP15.85■□□□□ 0.13
SDCBP-201ENST00000260130 YIPF3Q9GZM5 350 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 REXO4Q9GZR2 422 aaKnown RBP15.85■□□□□ 0.13
SDCBP-201ENST00000260130 PRM3Q9NNZ6 103 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 C14orf105Q9NVL8 296 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 HCN3Q9P1Z3 774 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 TSC22D4Q9Y3Q8 395 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 KCNMB2Q9Y691 235 aa15.85■□□□□ 0.13
SDCBP-201ENST00000260130 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.85■□□□□ 0.13
SDCBP-201ENST00000260130 CHD6Q8TD26 2715 aa15.84■□□□□ 0.13
SDCBP-201ENST00000260130 ZNF860A6NHJ4 632 aa15.84■□□□□ 0.13
SDCBP-201ENST00000260130 BMP10O95393 424 aa15.84■□□□□ 0.13
SDCBP-201ENST00000260130 MMP11P24347 488 aa15.84■□□□□ 0.13
SDCBP-201ENST00000260130 CCR10P46092 362 aa15.84■□□□□ 0.13
SDCBP-201ENST00000260130 CLCQ05315 142 aa15.84■□□□□ 0.13
SDCBP-201ENST00000260130 TRAF3Q13114 568 aa15.84■□□□□ 0.13
SDCBP-201ENST00000260130 LINC00303Q3SY05 128 aa15.84■□□□□ 0.13
SDCBP-201ENST00000260130 MILR1Q7Z6M3 343 aa15.84■□□□□ 0.13
SDCBP-201ENST00000260130 RDH11Q8TC12 318 aa15.84■□□□□ 0.13
SDCBP-201ENST00000260130 GAL3ST3Q96A11 431 aa15.84■□□□□ 0.13
SDCBP-201ENST00000260130 REPS1Q96D71 796 aa15.84■□□□□ 0.13
SDCBP-201ENST00000260130 L3HYPDHQ96EM0 354 aa15.84■□□□□ 0.13
SDCBP-201ENST00000260130 FAR2Q96K12 515 aa15.84■□□□□ 0.13
SDCBP-201ENST00000260130 IP6K3Q96PC2 410 aa15.84■□□□□ 0.13
SDCBP-201ENST00000260130 UBL7Q96S82 380 aaPredicted RBP15.84■□□□□ 0.13
SDCBP-201ENST00000260130 CRB3Q9BUF7 120 aa15.84■□□□□ 0.13
SDCBP-201ENST00000260130 CLK4Q9HAZ1 481 aaKnown RBP15.84■□□□□ 0.13
SDCBP-201ENST00000260130 ACSS2Q9NR19 701 aa15.84■□□□□ 0.13
SDCBP-201ENST00000260130 C4orf51C9J302 202 aa15.83■□□□□ 0.13
SDCBP-201ENST00000260130 PPP6CO00743 305 aa15.83■□□□□ 0.13
SDCBP-201ENST00000260130 ERI3O43414 337 aaKnown RBP15.83■□□□□ 0.13
SDCBP-201ENST00000260130 OTCP00480 354 aa15.83■□□□□ 0.13
SDCBP-201ENST00000260130 IGHEP01854 428 aa15.83■□□□□ 0.13
SDCBP-201ENST00000260130 TSPAN8P19075 237 aa15.83■□□□□ 0.13
SDCBP-201ENST00000260130 ACTR3P61158 418 aa15.83■□□□□ 0.13
SDCBP-201ENST00000260130 RBBP7Q16576 425 aa15.83■□□□□ 0.13
SDCBP-201ENST00000260130 RIPOR1Q6ZS17 1223 aa15.83■□□□□ 0.13
SDCBP-201ENST00000260130 OR2L5Q8NG80 312 aa15.83■□□□□ 0.13
SDCBP-201ENST00000260130 HUS1BQ8NHY5 278 aa15.83■□□□□ 0.13
SDCBP-201ENST00000260130 PIWIL2Q8TC59 973 aaKnown RBP15.83■□□□□ 0.13
SDCBP-201ENST00000260130 TRPC4APQ8TEL6 797 aa15.83■□□□□ 0.13
SDCBP-201ENST00000260130 F2RL3Q96RI0 385 aa15.83■□□□□ 0.13
SDCBP-201ENST00000260130 ARHGAP9Q9BRR9 750 aa15.83■□□□□ 0.13
SDCBP-201ENST00000260130 THTPAQ9BU02 230 aa15.83■□□□□ 0.13
SDCBP-201ENST00000260130 MS4A8Q9BY19 250 aa15.83■□□□□ 0.13
SDCBP-201ENST00000260130 ZNF395Q9H8N7 513 aaPredicted RBP15.83■□□□□ 0.13
SDCBP-201ENST00000260130 SEMA3GQ9NS98 782 aa15.83■□□□□ 0.13
SDCBP-201ENST00000260130 ZFYVE26Q68DK2 2539 aa15.83■□□□□ 0.13
SDCBP-201ENST00000260130 CPA3P15088 417 aa15.83■□□□□ 0.12
SDCBP-201ENST00000260130 ANPEPP15144 967 aa15.83■□□□□ 0.12
SDCBP-201ENST00000260130 CALRP27797 417 aaKnown RBP15.83■□□□□ 0.12
SDCBP-201ENST00000260130 PIK3CBP42338 1070 aa15.83■□□□□ 0.12
SDCBP-201ENST00000260130 XCR1P46094 333 aa15.83■□□□□ 0.12
SDCBP-201ENST00000260130 PLA2G16P53816 162 aa15.83■□□□□ 0.12
SDCBP-201ENST00000260130 BTN3A2P78410 334 aa15.83■□□□□ 0.12
SDCBP-201ENST00000260130 DDX39BQ13838 428 aaKnown RBP15.83■□□□□ 0.12
SDCBP-201ENST00000260130 GSTA3Q16772 222 aa15.83■□□□□ 0.12
SDCBP-201ENST00000260130 TRIM40Q6P9F5 258 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms