RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 STK11Q15831 433 aa10.57□□□□□ -0.72
COPA-201ENST00000241704 LPAL2Q16609 132 aa10.57□□□□□ -0.72
COPA-201ENST00000241704 KDELC1Q6UW63 502 aa10.57□□□□□ -0.72
COPA-201ENST00000241704 TMEM25Q86YD3 366 aa10.57□□□□□ -0.72
COPA-201ENST00000241704 OR4E2Q8NGC2 313 aa10.57□□□□□ -0.72
COPA-201ENST00000241704 DNASE1L2Q92874 299 aa10.57□□□□□ -0.72
COPA-201ENST00000241704 KHSRPQ92945 711 aaKnown RBP eCLIP10.57□□□□□ -0.727e-7■■□□□ 12.5
COPA-201ENST00000241704 SCAMP4Q969E2 229 aa10.57□□□□□ -0.72
COPA-201ENST00000241704 KLF16Q9BXK1 252 aaPredicted RBP10.57□□□□□ -0.72
COPA-201ENST00000241704 ZBTB20Q9HC78 741 aaPredicted RBP10.57□□□□□ -0.72
COPA-201ENST00000241704 ZNF304Q9HCX3 659 aa10.57□□□□□ -0.72
COPA-201ENST00000241704 MAGEB17A8MXT2 336 aa10.57□□□□□ -0.72
COPA-201ENST00000241704 TSPAN6O43657 245 aa10.57□□□□□ -0.72
COPA-201ENST00000241704 PDGFAP04085 211 aa10.57□□□□□ -0.72
COPA-201ENST00000241704 FEN1P39748 380 aaKnown RBP10.57□□□□□ -0.72
COPA-201ENST00000241704 AP2S1P53680 142 aaPredicted RBP10.57□□□□□ -0.72
COPA-201ENST00000241704 PSAPL1Q6NUJ1 521 aa10.57□□□□□ -0.72
COPA-201ENST00000241704 RPS27LQ71UM5 84 aaKnown RBP10.57□□□□□ -0.72
COPA-201ENST00000241704 PRSS48Q7RTY5 328 aa10.57□□□□□ -0.72
COPA-201ENST00000241704 C12orf10Q9HB07 376 aa10.57□□□□□ -0.72
COPA-201ENST00000241704 HCFC1R1Q9NWW0 138 aa10.57□□□□□ -0.72
COPA-201ENST00000241704 HCSTQ9UBK5 93 aa10.57□□□□□ -0.72
COPA-201ENST00000241704 ZMAT5Q9UDW3 170 aaKnown RBP10.57□□□□□ -0.72
COPA-201ENST00000241704 PHF11Q9UIL8 331 aa10.57□□□□□ -0.72
COPA-201ENST00000241704 A0A0G2JN53 185 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 MEN1O00255 615 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 MYL12BO14950 172 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 NAT2P11245 290 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 LAMP2P13473 410 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 AQP1P29972 269 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 CD70P32970 193 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 RPS5P46782 204 aaKnown RBP10.56□□□□□ -0.72
COPA-201ENST00000241704 PGDP52209 483 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 TMEM115Q12893 351 aaPredicted RBP10.56□□□□□ -0.72
COPA-201ENST00000241704 FAM214AQ32MH5 1076 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 TCEAL5Q5H9L2 206 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 COQ5Q5HYK3 327 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 ARSKQ6UWY0 536 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 UBQLNLQ8IYU4 475 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 TTLQ8NG68 377 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 FGF13Q92913 245 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 WDR92Q96MX6 357 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 SPATA9Q9BWV2 254 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 CD244Q9BZW8 370 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 SLC6A15Q9H2J7 730 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 GLTPQ9NZD2 209 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 EMC3Q9P0I2 261 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 SSC5DA1L4H1 1573 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 ADAM12O43184 909 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 CCR8P51685 355 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 IFITM2Q01629 132 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 SPIBQ01892 262 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 GALEQ14376 348 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 SLBPQ14493 270 aaKnown RBP eCLIP10.56□□□□□ -0.72
COPA-201ENST00000241704 PRAMEF14Q5SWL7 426 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 PRAMEF13Q5VWM6 474 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 AGTRAPQ6RW13 159 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 ZDHHC21Q8IVQ6 265 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 ZZZ3Q8IYH5 903 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 TANKQ92844 425 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 CRELD1Q96HD1 420 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 DUSP26Q9BV47 211 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 STRADBQ9C0K7 418 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 SNTG1Q9NSN8 517 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 CLN6Q9NWW5 311 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 MKL2Q9ULH7 1088 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 CLDN24A6NM45 220 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 ZNF217O75362 1048 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 PSIP1O75475 530 aaKnown RBP10.56□□□□□ -0.72
COPA-201ENST00000241704 FDXRP22570 491 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 ETV1P50549 477 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 RIPPLY1Q0D2K3 151 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 C1orf61Q13536 156 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 GCNT6Q5T4J0 391 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 NRARPQ7Z6K4 114 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 THOC6Q86W42 341 aaKnown RBP10.56□□□□□ -0.72
COPA-201ENST00000241704 VWA5B2Q8N398 1253 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 HYLS1Q96M11 299 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 FNDC11Q9BVV2 318 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 PPA2Q9H2U2 334 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 GSTK1Q9Y2Q3 226 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 HCN4Q9Y3Q4 1203 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 CLCA3PQ9Y6N3 262 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 HSPE1-MOB4S4R3N1 261 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 WNK3Q9BYP7 1800 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 MRPS14O60783 128 aaKnown RBP10.56□□□□□ -0.72
COPA-201ENST00000241704 NPPAP01160 153 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 ALPLP05186 524 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 SRPRAP08240 638 aaKnown RBP10.56□□□□□ -0.72
COPA-201ENST00000241704 TRAPPC2P0DI81 140 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 TRAPPC2BP0DI82 140 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 ACRV1P26436 265 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 ARRB2P32121 409 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 RYKP34925 604 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 RHAGQ02094 409 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 TSC22D1Q15714 1073 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 GDPD3Q7L5L3 318 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 PM20D2Q8IYS1 436 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 MFSD4AQ8N468 514 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 ESX1Q8N693 406 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms