RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 DDX39BQ13838 428 aaKnown RBP12.88□□□□□ -0.35
VEGFA-201ENST00000230480 MPP2Q14168 576 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 PCLAFQ15004 111 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 HIST2H2ACQ16777 129 aaPredicted RBP12.88□□□□□ -0.35
VEGFA-201ENST00000230480 MINDY4Q4G0A6 757 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 SFT2D3Q587I9 215 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 B3GNTL1Q67FW5 361 aaPredicted RBP12.88□□□□□ -0.35
VEGFA-201ENST00000230480 HIST2H2AA3Q6FI13 130 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 H3F3CQ6NXT2 135 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 QSOX2Q6ZRP7 698 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 MILR1Q7Z6M3 343 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 OR6Y1Q8NGX8 325 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 ANKRD9Q96BM1 317 aaPredicted RBP12.88□□□□□ -0.35
VEGFA-201ENST00000230480 CMTM7Q96FZ5 175 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 KCNA7Q96RP8 456 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 SERINC2Q96SA4 455 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 TBCDQ9BTW9 1192 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 ROPN1BQ9BZX4 212 aaPredicted RBP12.88□□□□□ -0.35
VEGFA-201ENST00000230480 ROPN1Q9HAT0 212 aaPredicted RBP12.88□□□□□ -0.35
VEGFA-201ENST00000230480 GPR83Q9NYM4 423 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 ZNF223Q9UK11 482 aaPredicted RBP12.88□□□□□ -0.35
VEGFA-201ENST00000230480 PLLPQ9Y342 182 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 ANGPTL3Q9Y5C1 460 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 PCDHGA11Q9Y5H2 935 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 EML6Q6ZMW3 1958 aa12.87□□□□□ -0.35
VEGFA-201ENST00000230480 MYOCOSA0A1B0GUC4 107 aa12.87□□□□□ -0.35
VEGFA-201ENST00000230480 A0A1W2PS29 197 aa12.87□□□□□ -0.35
VEGFA-201ENST00000230480 ERLIN1O75477 346 aa12.87□□□□□ -0.35
VEGFA-201ENST00000230480 PDYNP01213 254 aa12.87□□□□□ -0.35
VEGFA-201ENST00000230480 SERPINA7P05543 415 aa12.87□□□□□ -0.35
VEGFA-201ENST00000230480 KRT15P19012 456 aa12.87□□□□□ -0.35
VEGFA-201ENST00000230480 TPP2P29144 1249 aaPredicted RBP12.87□□□□□ -0.35
VEGFA-201ENST00000230480 SOX18P35713 384 aa12.87□□□□□ -0.35
VEGFA-201ENST00000230480 ETV4P43268 484 aa12.87□□□□□ -0.35
VEGFA-201ENST00000230480 CCNG1P51959 295 aa12.87□□□□□ -0.35
VEGFA-201ENST00000230480 GALNT1Q10472 559 aaPredicted RBP12.87□□□□□ -0.35
VEGFA-201ENST00000230480 CUL3Q13618 768 aa12.87□□□□□ -0.35
VEGFA-201ENST00000230480 ABRAXAS2Q15018 415 aa12.87□□□□□ -0.35
VEGFA-201ENST00000230480 PLEKHN1Q494U1 663 aaPredicted RBP12.87□□□□□ -0.35
VEGFA-201ENST00000230480 TMEM35AQ53FP2 167 aa12.87□□□□□ -0.35
VEGFA-201ENST00000230480 BEND6Q5SZJ8 279 aaPredicted RBP12.87□□□□□ -0.35
VEGFA-201ENST00000230480 FRG2Q64ET8 278 aa12.87□□□□□ -0.35
VEGFA-201ENST00000230480 C18orf63Q68DL7 685 aa12.87□□□□□ -0.35
VEGFA-201ENST00000230480 OR4C11Q6IEV9 310 aa12.87□□□□□ -0.35
VEGFA-201ENST00000230480 DGAT2L6Q6ZPD8 337 aa12.87□□□□□ -0.35
VEGFA-201ENST00000230480 FAM47BQ8NA70 645 aa12.87□□□□□ -0.35
VEGFA-201ENST00000230480 UBE2E3Q969T4 207 aa12.87□□□□□ -0.35
VEGFA-201ENST00000230480 C11orf24Q96F05 449 aaPredicted RBP12.87□□□□□ -0.35
VEGFA-201ENST00000230480 THOC3Q96J01 351 aaKnown RBP12.87□□□□□ -0.35
VEGFA-201ENST00000230480 PTCHD1Q96NR3 888 aa12.87□□□□□ -0.35
VEGFA-201ENST00000230480 ZIM3Q96PE6 472 aa12.87□□□□□ -0.35
VEGFA-201ENST00000230480 FRG2BQ96QU4 278 aa12.87□□□□□ -0.35
VEGFA-201ENST00000230480 ZNF382Q96SR6 550 aa12.87□□□□□ -0.35
VEGFA-201ENST00000230480 EPN3Q9H201 632 aa12.87□□□□□ -0.35
VEGFA-201ENST00000230480 ACBD3Q9H3P7 528 aa12.87□□□□□ -0.35
VEGFA-201ENST00000230480 DDX31Q9H8H2 851 aaKnown RBP12.87□□□□□ -0.35
VEGFA-201ENST00000230480 OXSMQ9NWU1 459 aa12.87□□□□□ -0.35
VEGFA-201ENST00000230480 ATG4BQ9Y4P1 393 aa12.87□□□□□ -0.35
VEGFA-201ENST00000230480 ZGRF1Q86YA3 2104 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 NSG1A0A0A6YYJ2 146 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 A0A1W2PR48 441 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 URADA6NGE7 173 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 MANBAO00462 879 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 SPAG7O75391 227 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 SUPT7LO94864 414 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 ITGA3P26006 1051 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 SERPINB1P30740 379 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 ST13P50502 369 aaKnown RBP12.86□□□□□ -0.35
VEGFA-201ENST00000230480 PGDP52209 483 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 NAGLUP54802 743 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 DNAJB13P59910 316 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 IGLV3-21P80748 117 aaPredicted RBP12.86□□□□□ -0.35
VEGFA-201ENST00000230480 NSDHLQ15738 373 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 VWA5B1Q5TIE3 1220 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 PLAG1Q6DJT9 500 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 TRIM40Q6P9F5 258 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 EXOC3L1Q86VI1 746 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 MYLK4Q86YV6 388 aaPredicted RBP12.86□□□□□ -0.35
VEGFA-201ENST00000230480 C10orf107Q8IVU9 208 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 ZCCHC7Q8N3Z6 543 aaKnown RBP12.86□□□□□ -0.35
VEGFA-201ENST00000230480 RIBC1Q8N443 379 aaPredicted RBP12.86□□□□□ -0.35
VEGFA-201ENST00000230480 KIF2BQ8N4N8 673 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 CLEC1AQ8NC01 280 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 CATSPER1Q8NEC5 780 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 BRIX1Q8TDN6 353 aaKnown RBP12.86□□□□□ -0.35
VEGFA-201ENST00000230480 ELP5Q8TE02 316 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 AGAP11Q8TF27 550 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 KCNC2Q96PR1 638 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 HBEGFQ99075 208 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 GATA5Q9BWX5 397 aaPredicted RBP12.86□□□□□ -0.35
VEGFA-201ENST00000230480 LHPPQ9H008 270 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 LYRM4Q9HD34 91 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 PRDM9Q9NQV7 894 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 C5AR2Q9P296 337 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 TRPS1Q9UHF7 1281 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 ADGRE2Q9UHX3 823 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 GRID1Q9ULK0 1009 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 PPIEQ9UNP9 301 aaKnown RBP12.86□□□□□ -0.35
VEGFA-201ENST00000230480 CCL27Q9Y4X3 112 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 TIMM22Q9Y584 194 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms