RNA–Protein interactions for RNA: ENST00000222399.10

LAMB1-201, Transcript of laminin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMB1, Length 5,725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-201ENST00000222399 CCDC116Q8IYX3 515 aa13.09□□□□□ -0.31
LAMB1-201ENST00000222399 INO80EQ8NBZ0 244 aaPredicted RBP13.09□□□□□ -0.31
LAMB1-201ENST00000222399 NSUN5Q96P11 429 aaKnown RBP13.09□□□□□ -0.31
LAMB1-201ENST00000222399 PELOQ9BRX2 385 aaKnown RBP13.09□□□□□ -0.31
LAMB1-201ENST00000222399 DOHHQ9BU89 302 aa13.09□□□□□ -0.31
LAMB1-201ENST00000222399 STRADBQ9C0K7 418 aa13.09□□□□□ -0.31
LAMB1-201ENST00000222399 WDR6Q9NNW5 1121 aaKnown RBP13.09□□□□□ -0.31
LAMB1-201ENST00000222399 DNAJC27Q9NZQ0 273 aa13.09□□□□□ -0.31
LAMB1-201ENST00000222399 LIPT1Q9Y234 373 aa13.09□□□□□ -0.31
LAMB1-201ENST00000222399 KANTRA0A1W2PQU2 76 aa13.09□□□□□ -0.31
LAMB1-201ENST00000222399 OR2AT4A6NND4 320 aa13.09□□□□□ -0.31
LAMB1-201ENST00000222399 HEPACAM2A8MVW5 462 aa13.09□□□□□ -0.31
LAMB1-201ENST00000222399 SOX30O94993 753 aa13.09□□□□□ -0.31
LAMB1-201ENST00000222399 HPRP00739 348 aa13.09□□□□□ -0.31
LAMB1-201ENST00000222399 OR12D1P0DN82 309 aa13.09□□□□□ -0.31
LAMB1-201ENST00000222399 FUT4P22083 530 aa13.09□□□□□ -0.31
LAMB1-201ENST00000222399 RPS15AP62244 130 aaKnown RBP13.09□□□□□ -0.31
LAMB1-201ENST00000222399 TBPL1P62380 186 aa13.09□□□□□ -0.31
LAMB1-201ENST00000222399 BNIP3Q12983 259 aa13.09□□□□□ -0.31
LAMB1-201ENST00000222399 RPL13AP3Q6NVV1 102 aa13.09□□□□□ -0.31
LAMB1-201ENST00000222399 CHRDL2Q6WN34 429 aa13.09□□□□□ -0.31
LAMB1-201ENST00000222399 TCEANCQ8N8B7 351 aa13.09□□□□□ -0.31
LAMB1-201ENST00000222399 AIG1Q9NVV5 245 aa13.09□□□□□ -0.31
LAMB1-201ENST00000222399 TTC34A8MYJ7 566 aa13.08□□□□□ -0.31
LAMB1-201ENST00000222399 H3BSA7 217 aa13.08□□□□□ -0.31
LAMB1-201ENST00000222399 HTRA2O43464 458 aaPredicted RBP13.08□□□□□ -0.31
LAMB1-201ENST00000222399 CSN2P05814 226 aa13.08□□□□□ -0.31
LAMB1-201ENST00000222399 HCKP08631 526 aa13.08□□□□□ -0.31
LAMB1-201ENST00000222399 CEBPGP53567 150 aa13.08□□□□□ -0.31
LAMB1-201ENST00000222399 GSCP56915 257 aaPredicted RBP13.08□□□□□ -0.31
LAMB1-201ENST00000222399 PRKCDQ05655 676 aa13.08□□□□□ -0.31
LAMB1-201ENST00000222399 NIPAL4Q0D2K0 466 aa13.08□□□□□ -0.31
LAMB1-201ENST00000222399 MAD2L1BPQ15013 274 aaPredicted RBP13.08□□□□□ -0.31
LAMB1-201ENST00000222399 SPERTQ8NA61 448 aa13.08□□□□□ -0.31
LAMB1-201ENST00000222399 PSD4Q8NDX1 1056 aa13.08□□□□□ -0.31
LAMB1-201ENST00000222399 NPC1O15118 1278 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 ITGA5P08648 1049 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 ZMYND11Q15326 602 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 SFT2D3Q587I9 215 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 NUP43Q8NFH3 380 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 HDAC2Q92769 488 aaKnown RBP13.08□□□□□ -0.32
LAMB1-201ENST00000222399 PIP5K1AQ99755 562 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 TTYH2Q9BSA4 534 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 POLDIP3Q9BY77 421 aaKnown RBP13.08□□□□□ -0.32
LAMB1-201ENST00000222399 HHATLQ9HCP6 504 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 ZNF69Q9UC07 566 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 OR6C74A6NCV1 312 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 EIF1AXP47813 144 aaKnown RBP13.08□□□□□ -0.32
LAMB1-201ENST00000222399 DHCR24Q15392 516 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 OCLNQ16625 522 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 LRIF1Q5T3J3 769 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 PSAPL1Q6NUJ1 521 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 MFSD2AQ8NA29 543 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 SHKBP1Q8TBC3 707 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 FAM129BQ96TA1 746 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 GPRC5BQ9NZH0 403 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 MKLN1Q9UL63 735 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 CDH10Q9Y6N8 788 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 HTR3EA5X5Y0 456 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 E7EQ34 232 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 TP53I11O14683 189 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 PROM1O43490 865 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 FESP07332 822 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 SLC15A1P46059 708 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 CDKN2DP55273 166 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 GRIK2Q13002 908 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 VMACQ2NL98 169 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 SCGB2B2Q4G0G5 96 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 KRTCAP2Q8N6L1 136 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 SEC14L1Q92503 715 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 SOX1O00570 391 aaPredicted RBP13.08□□□□□ -0.32
LAMB1-201ENST00000222399 EIF1AYO14602 144 aaKnown RBP13.08□□□□□ -0.32
LAMB1-201ENST00000222399 VILLO15195 856 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 ONECUT3O60422 494 aaPredicted RBP13.08□□□□□ -0.32
LAMB1-201ENST00000222399 CYP17A1P05093 508 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 OXTRP30559 389 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 KCNJ5P48544 419 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 CLRN1P58418 232 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 CDKL1Q00532 357 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 GRB7Q14451 532 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 TMEM35AQ53FP2 167 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 DGLUCYQ7Z3D6 616 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 OR2L8Q8NGY9 312 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 S100A16Q96FQ6 103 aaKnown RBP13.08□□□□□ -0.32
LAMB1-201ENST00000222399 BARD1Q99728 777 aaKnown RBP13.08□□□□□ -0.32
LAMB1-201ENST00000222399 METTL8Q9H825 291 aaKnown RBP13.08□□□□□ -0.32
LAMB1-201ENST00000222399 ASB6Q9NWX5 421 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 PCDHGA3Q9Y5H0 932 aa13.08□□□□□ -0.32
LAMB1-201ENST00000222399 A0A1W2PQU0 124 aa13.07□□□□□ -0.32
LAMB1-201ENST00000222399 MAN2B1O00754 1011 aa13.07□□□□□ -0.32
LAMB1-201ENST00000222399 BCKDHAP12694 445 aa13.07□□□□□ -0.32
LAMB1-201ENST00000222399 GABRA3P34903 492 aa13.07□□□□□ -0.32
LAMB1-201ENST00000222399 OR1E2P47887 323 aa13.07□□□□□ -0.32
LAMB1-201ENST00000222399 SLAMF1Q13291 335 aa13.07□□□□□ -0.32
LAMB1-201ENST00000222399 UAP1L1Q3KQV9 507 aa13.07□□□□□ -0.32
LAMB1-201ENST00000222399 ZNF404Q494X3 552 aa13.07□□□□□ -0.32
LAMB1-201ENST00000222399 NXPE4Q6UWF7 544 aa13.07□□□□□ -0.32
LAMB1-201ENST00000222399 ZNF367Q7RTV3 350 aa13.07□□□□□ -0.32
LAMB1-201ENST00000222399 ENDOVQ8N8Q3 282 aaKnown RBP13.07□□□□□ -0.32
LAMB1-201ENST00000222399 TUBA1CQ9BQE3 449 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms