RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 CCL5P13501 91 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 MAGEA8P43361 318 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 ARSFP54793 590 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 CLRN1P58418 232 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 OR5T1Q8NG75 326 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 OR9A1PQ8NGU1 263 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 KIAA1191Q96A73 305 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 INPP5KQ9BT40 448 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 TMEM248Q9NWD8 314 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 TEX13DA0A0J9YY54 714 aaPredicted RBP13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 A0A1W2PQ45 241 aaPredicted RBP13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 A0A1W2PQY0 241 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 MYADML2A6NDP7 307 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 E2F3O00716 465 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 PRAMEF11O60813 436 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 ABCB7O75027 752 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 FHP07954 510 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 ARSDP51689 593 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 APLP1P51693 650 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 MLLT6P55198 1093 aaPredicted RBP13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 AIFM2Q9BRQ8 373 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 RDH8Q9NYR8 311 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 FETUBQ9UGM5 382 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 PDX1P52945 283 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 FAM214AQ32MH5 1076 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 ZNF404Q494X3 552 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 UNC50Q53HI1 259 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 CDKL4Q5MAI5 379 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 SLC36A4Q6YBV0 504 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 TIGD4Q8IY51 512 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 NSMAFQ92636 917 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 MCHR1Q99705 422 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 INSL5Q9Y5Q6 135 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 IFT172Q9UG01 1749 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 RLN2P04090 185 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 FPGSQ05932 587 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 SLAMF1Q13291 335 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 GPR33Q49SQ1 333 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 KLBQ86Z14 1044 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 TMEM156Q8N614 296 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 MSANTD3Q96H12 275 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 GPR62Q9BZJ7 368 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 MTG2Q9H4K7 406 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 MAN2C1Q9NTJ4 1040 aa13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 ZNF701Q9NV72 531 aaPredicted RBP13.1□□□□□ -0.31
TGFBR3-201ENST00000212355 ISPDA4D126 451 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 SQSTM1Q13501 440 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 GAS6Q14393 721 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 C6orf136Q5SQH8 315 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 PYHIN1Q6K0P9 492 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 NCEH1Q6PIU2 408 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 CHRDL2Q6WN34 429 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 TPRG1Q6ZUI0 275 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 WDR53Q7Z5U6 358 aaPredicted RBP13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 LMNTD1Q8N9Z9 388 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.09□□□□□ -0.311e-8■■□□□ 13.4
TGFBR3-201ENST00000212355 HERPUD2Q9BSE4 406 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 ASPNQ9BXN1 380 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 FBRSQ9HAH7 460 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 CFL2Q9Y281 166 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 PCDHB3Q9Y5E6 796 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 SLC33A1O00400 549 aaPredicted RBP13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 SDHDO14521 159 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 MUSKO15146 869 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 PRMT3O60678 531 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 SDC3O75056 442 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 SNAI1O95863 264 aaPredicted RBP13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 ARSAP15289 507 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 GALK2Q01415 458 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 USF2Q15853 346 aaPredicted RBP13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 ZNF773Q6PK81 442 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 UBQLNLQ8IYU4 475 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 OR51L1Q8NGJ5 315 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 MGAT4BQ9UQ53 548 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 NID2Q14112 1375 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 A0A0U1RQF3 1178 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 GRID2O43424 1007 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 RFPL2O75678 378 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 S100A2P29034 98 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 ST3GAL3Q11203 375 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 PIAS4Q8N2W9 510 aaPredicted RBP13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 OR10T2Q8NGX3 314 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 FAM46AQ96IP4 442 aaKnown RBP13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 TGM7Q96PF1 710 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 NPY6RQ99463 290 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 CUEDC1Q9NWM3 386 aaPredicted RBP13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 HIF3AQ9Y2N7 669 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 WDR45Q9Y484 360 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 PCDHGB7Q9Y5F8 929 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 TCRBV21S2A2A0A5A6 115 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 KANK2Q63ZY3 851 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 PNLDC1Q8NA58 520 aaKnown RBP13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 DENND6BQ8NEG7 585 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 FRS2Q8WU20 508 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 SLC25A44Q96H78 314 aaPredicted RBP13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 ARHGAP39Q9C0H5 1083 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 C11orf49Q9H6J7 331 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 CD320Q9NPF0 282 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 STARD5Q9NSY2 213 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 KRBA1A5PL33 1030 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms