RNA–Protein interactions for RNA: ENSMUST00000021864.7

Ssr1-201, Transcript of Translocon-associated protein subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr1, Length 9,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-201ENSMUST00000021864 Foxn2E9Q7L6 429 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 ShdO88834 343 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Mamld1P0C6A2 803 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 EdnrbP48302 442 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 BckdhaP50136 442 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Tvp23aQ6NVH0 222 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Prrt3Q6PE13 971 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Kyat3Q71RI9 455 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Zfp429Q7M6Y0 485 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Zc3hav1lQ8BFR1 296 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Vmn1r185Q8R299 319 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Hmgn3Q9DCB1 99 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Gm7951E9Q0A2 213 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Gm6482F6YHC1 213 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Dok2O70469 412 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Bmp6P20722 510 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Dsc2P55292 902 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Pramel5Q7TPY4 500 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Olfr538Q7TRT5 310 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Acat3Q80X81 397 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Lix1lQ8BQ89 337 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Piwil4Q8CGT6 848 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Lrrc69Q9D9Q0 347 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Ndst3Q9EQH7 873 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Tgm7A2ART8 616 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 5830473C10RikF8VQ07 620 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 FpgtG5E8F4 590 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Fpr-rs3O88537 343 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 LplP11152 474 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 MtpnP62774 118 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 PepdQ11136 493 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Cd163Q2VLH6 1121 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Olfr1046Q7TR79 316 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Cxcr1Q810W6 351 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Slco2b1Q8BXB6 683 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Cpne1Q8C166 536 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Prps1l1Q8C5R8 318 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Slc29a4Q8R139 528 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Olfr63Q8VBW9 316 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Agpat3Q9D517 376 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Fank1Q9DAM9 344 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Stk19Q9JHN8 254 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Vmn2r56E9Q4U5 779 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Vmn2r112L7N221 857 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Gp5O08742 567 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Cd2P08920 344 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Tuba4aP68368 448 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Tbx5P70326 518 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Zc3h12aQ5D1E7 596 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Il17rcQ8K4C2 698 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Olfr164Q8VF87 315 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Pycr2Q922Q4 320 aaKnown RBP7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Lhfpl3Q9CTN8 222 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Clec4eQ9R0Q8 214 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 SqorQ9R112 450 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Gpr155A2AWR3 868 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Aldh3b3J3QMK6 479 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Cd68P31996 326 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 StomP54116 284 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Cnn2Q08093 305 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Mier2Q3U3N0 541 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Cpxcr1Q3V0P1 322 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Dnajc15Q78YY6 149 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Olfr1308Q7TQX0 320 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Gpr89aQ8BS95 455 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Ppp1r3bQ8C767 284 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 EloaQ8CB77 773 aaKnown RBP7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Rdh10Q8VCH7 341 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 PpcsQ8VDG5 311 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Olfr347Q8VGK2 312 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Elmod3Q91YP6 381 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 OptcQ920A0 328 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Slco1a6Q99J94 670 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Olfr560A0A1B0GSU5 314 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Wdr76A6PWY4 622 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Zfp395E9Q5N9 508 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 1700017D01RikG5E851 209 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Tuba1bP05213 451 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Tuba1aP68369 451 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Tuba1cP68373 449 aaKnown RBP7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Rpl10lP86048 214 aaKnown RBP7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Zdhhc11Q14AK4 347 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Pyroxd2Q3U4I7 581 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Fignl1Q8BPY9 683 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Pamr1Q8BU25 720 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Cbx7Q8VDS3 158 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Gpr37l1Q99JG2 481 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Sppl3Q9CUS9 384 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Jam2Q9JI59 298 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Scgb2b12S4R2L0 112 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Trbv4A0A075B5I2 113 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Catsperg1E9Q355 1151 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Vmn2r22E9Q7S8 853 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 JtbO88824 146 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Itgb1P09055 798 aaKnown RBP7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Lmo2P25801 158 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Fosl2P47930 326 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Meaf6Q2VPQ9 191 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Ccdc177Q3UHB8 706 aa7.98□□□□□ -1.13
Ssr1-201ENSMUST00000021864 Vamp1Q62442 118 aa7.98□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 38.9 ms