RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-231	ENST00000639599	ADAP2	Q9NPF8	381 aa		13.71	□□□□□ -0.21
TARDBP-231	ENST00000639599	TRMT1	Q9NXH9	659 aa	Known RBP	13.71	□□□□□ -0.21
TARDBP-231	ENST00000639599	YARS2	Q9Y2Z4	477 aa	Known RBP	13.71	□□□□□ -0.21
TARDBP-231	ENST00000639599	ZGRF1	Q86YA3	2104 aa		13.7	□□□□□ -0.22
TARDBP-231	ENST00000639599	ZNHIT1	O43257	154 aa		13.7	□□□□□ -0.22
TARDBP-231	ENST00000639599	CAPN3	P20807	821 aa		13.7	□□□□□ -0.22
TARDBP-231	ENST00000639599	PAFAH1B1	P43034	410 aa		13.7	□□□□□ -0.22
TARDBP-231	ENST00000639599	TSN	Q15631	228 aa	Known RBP	13.7	□□□□□ -0.22
TARDBP-231	ENST00000639599	PAGE2B	Q5JRK9	111 aa		13.7	□□□□□ -0.22
TARDBP-231	ENST00000639599	STEAP4	Q687X5	459 aa		13.7	□□□□□ -0.22
TARDBP-231	ENST00000639599	CAPN12	Q6ZSI9	719 aa		13.7	□□□□□ -0.22
TARDBP-231	ENST00000639599	CEP128	Q6ZU80	1094 aa		13.7	□□□□□ -0.22
TARDBP-231	ENST00000639599	CLNK	Q7Z7G1	428 aa		13.7	□□□□□ -0.22
TARDBP-231	ENST00000639599	ZC3HC1	Q86WB0	502 aa	Known RBP	13.7	□□□□□ -0.22
TARDBP-231	ENST00000639599	NFAM1	Q8NET5	270 aa	Predicted RBP	13.7	□□□□□ -0.22
TARDBP-231	ENST00000639599	CREB3L4	Q8TEY5	395 aa		13.7	□□□□□ -0.22
TARDBP-231	ENST00000639599	PWWP2A	Q96N64	755 aa		13.7	□□□□□ -0.22
TARDBP-231	ENST00000639599	SPOCK3	Q9BQ16	436 aa		13.7	□□□□□ -0.22
TARDBP-231	ENST00000639599	ROGDI	Q9GZN7	287 aa		13.7	□□□□□ -0.22
TARDBP-231	ENST00000639599	PITHD1	Q9GZP4	211 aa	Predicted RBP	13.7	□□□□□ -0.22
TARDBP-231	ENST00000639599	TP63	Q9H3D4	680 aa	Predicted RBP	13.7	□□□□□ -0.22
TARDBP-231	ENST00000639599	DNAJC11	Q9NVH1	559 aa		13.7	□□□□□ -0.22
TARDBP-231	ENST00000639599	GPRC5B	Q9NZH0	403 aa		13.7	□□□□□ -0.22
TARDBP-231	ENST00000639599	KCMF1	Q9P0J7	381 aa		13.7	□□□□□ -0.22
TARDBP-231	ENST00000639599	CPAMD8	Q8IZJ3	1885 aa		13.7	□□□□□ -0.22
TARDBP-231	ENST00000639599	C19orf84	I3L1E1	186 aa		13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	DYRK3	O43781	588 aa		13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	CLEC3A	O75596	197 aa		13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	PDE9A	O76083	593 aa		13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	SMIM10L1	P0DMW3	83 aa		13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	TFEB	P19484	476 aa		13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	GDF5	P43026	501 aa		13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	MTTP	P55157	894 aa		13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	TAS2R39	P59534	338 aa		13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	TLE4	Q04727	773 aa		13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	FRG1	Q14331	258 aa	Known RBP	13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	EFTUD2	Q15029	972 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	ELAVL1	Q15717	326 aa	Known RBP	13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	XKR6	Q5GH73	641 aa		13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	RNFT1	Q5M7Z0	435 aa		13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	HSDL2	Q6YN16	418 aa		13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	GK5	Q6ZS86	529 aa		13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	ZBED8	Q8IZ13	594 aa		13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	APCDD1L	Q8NCL9	501 aa		13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	SRFBP1	Q8NEF9	429 aa	Known RBP	13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	OR2L5	Q8NG80	312 aa		13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	RND1	Q92730	232 aa		13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	MS4A6E	Q96DS6	147 aa		13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	C14orf79	Q96F83	325 aa		13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	SMIM10	Q96HG1	83 aa		13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	SERINC2	Q96SA4	455 aa		13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	RHOJ	Q9H4E5	214 aa		13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	POPDC3	Q9HBV1	291 aa		13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	CD274	Q9NZQ7	290 aa		13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	COPS7A	Q9UBW8	275 aa		13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	IKZF3	Q9UKT9	509 aa		13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	TEX264	Q9Y6I9	313 aa		13.69	□□□□□ -0.22
TARDBP-231	ENST00000639599	HEATR5B	Q9P2D3	2071 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	FAM90A27P	A6NNH2	459 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	EFCAB8	A8MWE9	144 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	COX7A2	P14406	83 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	PPIA	P62937	165 aa	Known RBP	13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	POU4F1	Q01851	419 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	CALCOCO2	Q13137	446 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	LAPTM5	Q13571	262 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	TGFBI	Q15582	683 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	PDK4	Q16654	411 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	IL20RB	Q6UXL0	311 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	SLCO4C1	Q6ZQN7	724 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	RGS9BP	Q6ZS82	235 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	CDH24	Q86UP0	819 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	SLC22A16	Q86VW1	577 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	GPSM1	Q86YR5	675 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	SCUBE1	Q8IWY4	988 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	BBOF1	Q8ND07	529 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	PSD4	Q8NDX1	1056 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	C7orf57	Q8NEG2	295 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	OR5L2	Q8NGL0	311 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	OR5M3	Q8NGP4	307 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	EXT2	Q93063	718 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	KIAA1191	Q96A73	305 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	RHBDF1	Q96CC6	855 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	PTCD3	Q96EY7	689 aa	Known RBP	13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	DMRTA2	Q96SC8	542 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	EFCAB11	Q9BUY7	163 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	DERL2	Q9GZP9	239 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	ASB1	Q9Y576	335 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	PSAT1	Q9Y617	370 aa		13.68	□□□□□ -0.22
TARDBP-231	ENST00000639599	PRRC2C	Q9Y520	2896 aa	Known RBP	13.67	□□□□□ -0.22
TARDBP-231	ENST00000639599	LRIT2	A6NDA9	550 aa		13.67	□□□□□ -0.22
TARDBP-231	ENST00000639599	FAM166B	A8MTA8	275 aa		13.67	□□□□□ -0.22
TARDBP-231	ENST00000639599	FOXO6	A8MYZ6	492 aa		13.67	□□□□□ -0.22
TARDBP-231	ENST00000639599	CCDC188	H7C350	402 aa		13.67	□□□□□ -0.22
TARDBP-231	ENST00000639599	CCNT2	O60583	730 aa	Known RBP	13.67	□□□□□ -0.22
TARDBP-231	ENST00000639599	STK16	O75716	305 aa		13.67	□□□□□ -0.22
TARDBP-231	ENST00000639599	OR2J2	O76002	312 aa		13.67	□□□□□ -0.22
TARDBP-231	ENST00000639599	SEC31A	O94979	1220 aa	Known RBP	13.67	□□□□□ -0.22
TARDBP-231	ENST00000639599	CERS1	P27544	350 aa		13.67	□□□□□ -0.22
TARDBP-231	ENST00000639599	CHRNB4	P30926	498 aa		13.67	□□□□□ -0.22
TARDBP-231	ENST00000639599	HNRNPH1	P31943	449 aa	Known RBP	13.67	□□□□□ -0.22

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