RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 NFKBIDQ8NI38 313 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 ENKURQ8TC29 256 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 PIH1D2Q8WWB5 315 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 TM6SF2Q9BZW4 377 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 ATG10Q9H0Y0 220 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 NDUFB11Q9NX14 153 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 TRBV5-4A0A0C4DH59 114 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 GJB5O95377 273 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 SOX14O95416 240 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 ETHE1O95571 254 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 KLKB1P03952 638 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 ALAS2P22557 587 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 ITGB7P26010 798 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 PKLRP30613 574 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 UQCRC1P31930 480 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 GKP32189 559 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 CCR7P32248 378 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 SLC6A12P48065 614 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.63■□□□□ 0.73
PMS1-222ENST00000639501 CHIT1Q13231 466 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 MRPL58Q14197 206 aaKnown RBP19.63■□□□□ 0.73
PMS1-222ENST00000639501 PYDC2Q56P42 97 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 CXorf57Q6NSI4 855 aaKnown RBP19.63■□□□□ 0.73
PMS1-222ENST00000639501 TMC8Q8IU68 726 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 VRK3Q8IV63 474 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 LIX1LQ8IVB5 337 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 NPAS3Q8IXF0 933 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 SKA2Q8WVK7 121 aaPredicted RBP19.63■□□□□ 0.73
PMS1-222ENST00000639501 TTC9Q92623 222 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 TMEM203Q969S6 136 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 MYO19Q96H55 970 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 UROC1Q96N76 676 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 ACSL6Q9UKU0 697 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 YARS2Q9Y2Z4 477 aaKnown RBP19.63■□□□□ 0.73
PMS1-222ENST00000639501 HCN4Q9Y3Q4 1203 aa19.63■□□□□ 0.73
PMS1-222ENST00000639501 SEC14L5O43304 696 aa19.62■□□□□ 0.73
PMS1-222ENST00000639501 TSPAN19P0C672 248 aa19.62■□□□□ 0.73
PMS1-222ENST00000639501 CSTF2P33240 577 aaKnown RBP eCLIP19.62■□□□□ 0.73
PMS1-222ENST00000639501 CRISP1P54107 249 aa19.62■□□□□ 0.73
PMS1-222ENST00000639501 TNK1Q13470 666 aa19.62■□□□□ 0.73
PMS1-222ENST00000639501 FRMPD2BQ6IN97 320 aa19.62■□□□□ 0.73
PMS1-222ENST00000639501 TMIGD1Q6UXZ0 262 aa19.62■□□□□ 0.73
PMS1-222ENST00000639501 SPERTQ8NA61 448 aa19.62■□□□□ 0.73
PMS1-222ENST00000639501 GALNT6Q8NCL4 622 aa19.62■□□□□ 0.73
PMS1-222ENST00000639501 FAM193BQ96PV7 902 aaPredicted RBP19.62■□□□□ 0.73
PMS1-222ENST00000639501 POLR2J2Q9GZM3 115 aaKnown RBP19.62■□□□□ 0.73
PMS1-222ENST00000639501 MCOLN1Q9GZU1 580 aa19.62■□□□□ 0.73
PMS1-222ENST00000639501 AP5M1Q9H0R1 490 aa19.62■□□□□ 0.73
PMS1-222ENST00000639501 NMNAT1Q9HAN9 279 aaPredicted RBP19.62■□□□□ 0.73
PMS1-222ENST00000639501 ZFYVE1Q9HBF4 777 aa19.62■□□□□ 0.73
PMS1-222ENST00000639501 ATP13A2Q9NQ11 1180 aa19.62■□□□□ 0.73
PMS1-222ENST00000639501 MAT2BQ9NZL9 334 aa19.62■□□□□ 0.73
PMS1-222ENST00000639501 SNX11Q9Y5W9 270 aa19.62■□□□□ 0.73
PMS1-222ENST00000639501 K7ERQ8 282 aa19.62■□□□□ 0.73
PMS1-222ENST00000639501 AP2A2O94973 939 aa19.62■□□□□ 0.73
PMS1-222ENST00000639501 PIPP12273 146 aaPredicted RBP19.62■□□□□ 0.73
PMS1-222ENST00000639501 HLA-DMAP28067 261 aa19.62■□□□□ 0.73
PMS1-222ENST00000639501 XCR1P46094 333 aa19.62■□□□□ 0.73
PMS1-222ENST00000639501 C22orf42Q6IC83 251 aa19.62■□□□□ 0.73
PMS1-222ENST00000639501 PHC2Q8IXK0 858 aa19.62■□□□□ 0.73
PMS1-222ENST00000639501 ATP6V1C2Q8NEY4 427 aa19.62■□□□□ 0.73
PMS1-222ENST00000639501 ANKK1Q8NFD2 765 aa19.62■□□□□ 0.73
PMS1-222ENST00000639501 SOCS4Q8WXH5 440 aa19.62■□□□□ 0.73
PMS1-222ENST00000639501 MSLNLQ96KJ4 702 aa19.62■□□□□ 0.73
PMS1-222ENST00000639501 SPATA9Q9BWV2 254 aa19.62■□□□□ 0.73
PMS1-222ENST00000639501 HDHD5Q9BXW7 423 aa19.62■□□□□ 0.73
PMS1-222ENST00000639501 NARFLQ9H6Q4 476 aa19.62■□□□□ 0.73
PMS1-222ENST00000639501 TXNL4BQ9NX01 149 aaKnown RBP19.62■□□□□ 0.73
PMS1-222ENST00000639501 CLCA3PQ9Y6N3 262 aa19.62■□□□□ 0.73
PMS1-222ENST00000639501 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.61■□□□□ 0.73
PMS1-222ENST00000639501 POLR1CO15160 346 aaPredicted RBP19.61■□□□□ 0.73
PMS1-222ENST00000639501 PRMT3O60678 531 aa19.61■□□□□ 0.73
PMS1-222ENST00000639501 CLDN11O75508 207 aa19.61■□□□□ 0.73
PMS1-222ENST00000639501 VNN2O95498 520 aa19.61■□□□□ 0.73
PMS1-222ENST00000639501 RECKO95980 971 aa19.61■□□□□ 0.73
PMS1-222ENST00000639501 RAE1P78406 368 aaKnown RBP19.61■□□□□ 0.73
PMS1-222ENST00000639501 FCHO2Q0JRZ9 810 aa19.61■□□□□ 0.73
PMS1-222ENST00000639501 TARDBPQ13148 414 aaKnown RBP eCLIP19.61■□□□□ 0.73
PMS1-222ENST00000639501 ZNF177Q13360 481 aaPredicted RBP19.61■□□□□ 0.73
PMS1-222ENST00000639501 FLYWCH1Q4VC44 716 aa19.61■□□□□ 0.73
PMS1-222ENST00000639501 ZNF385BQ569K4 471 aa19.61■□□□□ 0.73
PMS1-222ENST00000639501 MFSD14CQ5VZR4 134 aa19.61■□□□□ 0.73
PMS1-222ENST00000639501 SYT14Q8NB59 555 aa19.61■□□□□ 0.73
PMS1-222ENST00000639501 OR4A15Q8NGL6 344 aa19.61■□□□□ 0.73
PMS1-222ENST00000639501 OR9Q1Q8NGQ5 310 aa19.61■□□□□ 0.73
PMS1-222ENST00000639501 FZD3Q9NPG1 666 aa19.61■□□□□ 0.73
PMS1-222ENST00000639501 THSD1Q9NS62 852 aa19.61■□□□□ 0.73
PMS1-222ENST00000639501 MALT1Q9UDY8 824 aa19.61■□□□□ 0.73
PMS1-222ENST00000639501 NINQ8N4C6 2090 aa19.61■□□□□ 0.73
PMS1-222ENST00000639501 GLYATL1P3A0A0U1RQE8 302 aa19.61■□□□□ 0.73
PMS1-222ENST00000639501 GADD45GO95257 159 aa19.61■□□□□ 0.73
PMS1-222ENST00000639501 MYCP01106 439 aaPredicted RBP19.61■□□□□ 0.73
PMS1-222ENST00000639501 UBL4AP11441 157 aa19.61■□□□□ 0.73
PMS1-222ENST00000639501 PSKH1P11801 424 aa19.61■□□□□ 0.73
PMS1-222ENST00000639501 APEX1P27695 318 aaKnown RBP19.61■□□□□ 0.73
PMS1-222ENST00000639501 RHOAP61586 193 aa19.61■□□□□ 0.73
PMS1-222ENST00000639501 TEAD4Q15561 434 aa19.61■□□□□ 0.73
PMS1-222ENST00000639501 ARMC12Q5T9G4 340 aa19.61■□□□□ 0.73
PMS1-222ENST00000639501 CPTPQ5TA50 214 aa19.61■□□□□ 0.73
PMS1-222ENST00000639501 PLCZ1Q86YW0 608 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms