RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 TRIM39Q9HCM9 518 aa14.19□□□□□ -0.14
CACNA1A-220ENST00000635988 SLC6A14Q9UN76 642 aa14.19□□□□□ -0.14
CACNA1A-220ENST00000635988 SCN10AQ9Y5Y9 1956 aa14.19□□□□□ -0.14
CACNA1A-220ENST00000635988 OR6C70A6NIJ9 312 aa14.19□□□□□ -0.14
CACNA1A-220ENST00000635988 UPK3BL1B0FP48 263 aa14.19□□□□□ -0.14
CACNA1A-220ENST00000635988 UPK3BL2E5RIL1 263 aa14.19□□□□□ -0.14
CACNA1A-220ENST00000635988 TLR4O00206 839 aa14.19□□□□□ -0.14
CACNA1A-220ENST00000635988 GJB5O95377 273 aa14.19□□□□□ -0.14
CACNA1A-220ENST00000635988 SRPRAP08240 638 aaKnown RBP14.19□□□□□ -0.14
CACNA1A-220ENST00000635988 CSF3P09919 207 aa14.19□□□□□ -0.14
CACNA1A-220ENST00000635988 CD83Q01151 205 aa14.19□□□□□ -0.14
CACNA1A-220ENST00000635988 DUSP4Q13115 394 aa14.19□□□□□ -0.14
CACNA1A-220ENST00000635988 ZNF630Q2M218 657 aaPredicted RBP14.19□□□□□ -0.14
CACNA1A-220ENST00000635988 XKR6Q5GH73 641 aa14.19□□□□□ -0.14
CACNA1A-220ENST00000635988 DGKKQ5KSL6 1271 aa14.19□□□□□ -0.14
CACNA1A-220ENST00000635988 DDI2Q5TDH0 399 aa14.19□□□□□ -0.14
CACNA1A-220ENST00000635988 TRIM40Q6P9F5 258 aa14.19□□□□□ -0.14
CACNA1A-220ENST00000635988 TAGAPQ8N103 731 aa14.19□□□□□ -0.14
CACNA1A-220ENST00000635988 CADM2Q8N3J6 435 aa14.19□□□□□ -0.14
CACNA1A-220ENST00000635988 HJURPQ8NCD3 748 aaPredicted RBP14.19□□□□□ -0.14
CACNA1A-220ENST00000635988 CREB3L4Q8TEY5 395 aa14.19□□□□□ -0.14
CACNA1A-220ENST00000635988 UBASH3BQ8TF42 649 aa14.19□□□□□ -0.14
CACNA1A-220ENST00000635988 ARHGAP39Q9C0H5 1083 aa14.19□□□□□ -0.14
CACNA1A-220ENST00000635988 POLR2J2Q9GZM3 115 aaKnown RBP14.19□□□□□ -0.14
CACNA1A-220ENST00000635988 H0YIV9 168 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 ENTPD6O75354 484 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 ADAP00813 363 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 ETFAP13804 333 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 PKLRP30613 574 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 HOXD11P31277 338 aaPredicted RBP14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 HTR2BP41595 481 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 MVDP53602 400 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 PFN3P60673 137 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 SPIN4Q56A73 249 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 CLLU1OSQ5K130 101 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 DDX53Q86TM3 631 aaKnown RBP14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 NANOGP1Q8N7R0 232 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 NFKBIDQ8NI38 313 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 DIRAS2Q96HU8 199 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 MTERF1Q99551 399 aaKnown RBP14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 TM6SF2Q9BZW4 377 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 FAM83DQ9H4H8 585 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 ABCB9Q9NP78 766 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 NDOR1Q9UHB4 597 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 GABRQQ9UN88 632 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 DSPPQ9NZW4 1301 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 NUP214P35658 2090 aaPredicted RBP14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 PRAMEF25A6NGN4 478 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 ERVH48-1M5A8F1 160 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 KPNA5O15131 536 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 COCHO43405 550 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 PROM1O43490 865 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 TPST2O60704 377 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 ZNF780AO75290 641 aaPredicted RBP14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 GASTP01350 101 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 POU1F1P28069 291 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 GZMKP49863 264 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 CDK6Q00534 326 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 TNK1Q13470 666 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 DDX39BQ13838 428 aaKnown RBP14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 PLEKHS1Q5SXH7 462 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 LCN1P1Q5VSP4 162 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 PLET1Q6UQ28 207 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 ZNF767PQ75MW2 155 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 SLC30A8Q8IWU4 369 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 LAS2Q8IYD9 372 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 HCAR2Q8TDS4 363 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 AP3S1Q92572 193 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 P2RY13Q9BPV8 354 aa14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 NMNAT1Q9HAN9 279 aaPredicted RBP14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 ZNF106Q9H2Y7 1883 aaKnown RBP14.18□□□□□ -0.14
CACNA1A-220ENST00000635988 J3KTA2 159 aa14.17□□□□□ -0.14
CACNA1A-220ENST00000635988 CDRT1O95170 752 aa14.17□□□□□ -0.14
CACNA1A-220ENST00000635988 VNN2O95498 520 aa14.17□□□□□ -0.14
CACNA1A-220ENST00000635988 TSPAN19P0C672 248 aa14.17□□□□□ -0.14
CACNA1A-220ENST00000635988 CKMT1AP12532 417 aa14.17□□□□□ -0.14
CACNA1A-220ENST00000635988 OSMP13725 252 aa14.17□□□□□ -0.14
CACNA1A-220ENST00000635988 NUDT1P36639 197 aa14.17□□□□□ -0.14
CACNA1A-220ENST00000635988 CSNK1DP48730 415 aa14.17□□□□□ -0.14
CACNA1A-220ENST00000635988 VEPH1Q14D04 833 aa14.17□□□□□ -0.14
CACNA1A-220ENST00000635988 GRHL2Q6ISB3 625 aa14.17□□□□□ -0.14
CACNA1A-220ENST00000635988 ANKS3Q6ZW76 656 aa14.17□□□□□ -0.14
CACNA1A-220ENST00000635988 RFPL4BQ6ZWI9 263 aa14.17□□□□□ -0.14
CACNA1A-220ENST00000635988 DCAF4L2Q8NA75 395 aa14.17□□□□□ -0.14
CACNA1A-220ENST00000635988 CLP1Q92989 425 aaKnown RBP14.17□□□□□ -0.14
CACNA1A-220ENST00000635988 SLC35A5Q9BS91 424 aa14.17□□□□□ -0.14
CACNA1A-220ENST00000635988 GPATCH2Q9NW75 528 aa14.17□□□□□ -0.14
CACNA1A-220ENST00000635988 TOR4AQ9NXH8 423 aa14.17□□□□□ -0.14
CACNA1A-220ENST00000635988 ATP6V1HQ9UI12 483 aa14.17□□□□□ -0.14
CACNA1A-220ENST00000635988 ANGPT4Q9Y264 503 aa14.17□□□□□ -0.14
CACNA1A-220ENST00000635988 A0A1W2PQL4 384 aaPredicted RBP14.17□□□□□ -0.14
CACNA1A-220ENST00000635988 ZNF840PA6NDX5 716 aa14.17□□□□□ -0.14
CACNA1A-220ENST00000635988 MYL12BO14950 172 aa14.17□□□□□ -0.14
CACNA1A-220ENST00000635988 POLR1CO15160 346 aaPredicted RBP14.17□□□□□ -0.14
CACNA1A-220ENST00000635988 HCN1O60741 890 aa14.17□□□□□ -0.14
CACNA1A-220ENST00000635988 CPNE3O75131 537 aaKnown RBP14.17□□□□□ -0.14
CACNA1A-220ENST00000635988 C1QBP02746 253 aa14.17□□□□□ -0.14
CACNA1A-220ENST00000635988 IFNW1P05000 195 aa14.17□□□□□ -0.14
CACNA1A-220ENST00000635988 CD22P20273 847 aa14.17□□□□□ -0.14
CACNA1A-220ENST00000635988 SLC9A3P48764 834 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms