RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 MKS1Q9NXB0 559 aa12.75□□□□□ -0.37
SYNGAP1-208ENST00000629380 ZDHHC3Q9NYG2 299 aa12.75□□□□□ -0.37
SYNGAP1-208ENST00000629380 PHYHO14832 338 aa12.75□□□□□ -0.37
SYNGAP1-208ENST00000629380 PROM1O43490 865 aa12.75□□□□□ -0.37
SYNGAP1-208ENST00000629380 RAB4BP61018 213 aa12.75□□□□□ -0.37
SYNGAP1-208ENST00000629380 BLOC1S5-TXNDC5H3BN57 136 aa12.75□□□□□ -0.37
SYNGAP1-208ENST00000629380 SLC31A1O15431 190 aa12.75□□□□□ -0.37
SYNGAP1-208ENST00000629380 KCNJ13O60928 360 aa12.75□□□□□ -0.37
SYNGAP1-208ENST00000629380 ZNF30P17039 623 aa12.75□□□□□ -0.37
SYNGAP1-208ENST00000629380 PTPRRQ15256 657 aa12.75□□□□□ -0.37
SYNGAP1-208ENST00000629380 ZNF630Q2M218 657 aaPredicted RBP12.75□□□□□ -0.37
SYNGAP1-208ENST00000629380 KCTD18Q6PI47 426 aaPredicted RBP12.75□□□□□ -0.37
SYNGAP1-208ENST00000629380 DZANK1Q9NVP4 752 aa12.75□□□□□ -0.37
SYNGAP1-208ENST00000629380 NMBRP28336 390 aa12.75□□□□□ -0.37
SYNGAP1-208ENST00000629380 FADDQ13158 208 aa12.75□□□□□ -0.37
SYNGAP1-208ENST00000629380 LINGO4Q6UY18 593 aa12.75□□□□□ -0.37
SYNGAP1-208ENST00000629380 METTL25Q8N6Q8 603 aa12.75□□□□□ -0.37
SYNGAP1-208ENST00000629380 TMEM175Q9BSA9 504 aa12.75□□□□□ -0.37
SYNGAP1-208ENST00000629380 MS4A12Q9NXJ0 267 aa12.75□□□□□ -0.37
SYNGAP1-208ENST00000629380 CREBL2O60519 120 aaPredicted RBP12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 INMTO95050 263 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 ZNF81P51508 661 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 LUMP51884 338 aaPredicted RBP12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 ZNF773Q6PK81 442 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 PXKQ7Z7A4 578 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 CPXM1Q96SM3 734 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 TTYH2Q9BSA4 534 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 EBF3Q9H4W6 596 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 CREBZFQ9NS37 354 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 KLHL21Q9UJP4 597 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 PTBP2Q9UKA9 531 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 NDRG2Q9UN36 371 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 TRIOBPQ9H2D6 2365 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 ARPC4-TTLL3A0A0A6YYG9 625 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 A8MXE2 369 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 C9IYK1 514 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 GTF2F2P13984 249 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 GJA9P57773 515 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 TRAPPC6BQ86SZ2 158 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 HS3ST5Q8IZT8 346 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 PDZD7Q9H5P4 517 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 HCN2Q9UL51 889 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 RPH3AQ9Y2J0 694 aaPredicted RBP12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 TRBC2A0A5B9 178 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 SAP18O00422 153 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 OAS1P00973 400 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 VTCN1Q7Z7D3 282 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 LRRN4CLQ8ND94 238 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 TBC1D15Q8TC07 691 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 SLC35F5Q8WV83 523 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 ALG3Q92685 438 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 FUBP3Q96I24 572 aaKnown RBP eCLIP12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 CARS2Q9HA77 564 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 THBS2P35442 1172 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 FRKP42685 505 aaPredicted RBP12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 ZNF169Q14929 603 aaPredicted RBP12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 TSTQ16762 297 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 DICER1Q9UPY3 1922 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 B4DGG1 531 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 CLIC1O00299 241 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 OAZ2O95190 189 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 TSPAN15O95858 294 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 ENGP17813 658 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 CLCA4Q14CN2 919 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 PDGFRLQ15198 375 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 TMPPEQ6ZT21 453 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 TSPAN33Q86UF1 283 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 SNX27Q96L92 541 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 LENG8Q96PV6 779 aaPredicted RBP12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 SLC6A7Q99884 636 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 ABCB8Q9NUT2 735 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 TAS2R9Q9NYW1 312 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 OAZ3Q9UMX2 235 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 DOCK7Q96N67 2140 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 LOC100130705A0A1B0GUX0 176 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 CAPN5O15484 640 aaPredicted RBP12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 OR4F21O95013 312 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 SMPD1P17405 629 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 UQCRC1P31930 480 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 RSU1Q15404 277 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 TRIB2Q92519 343 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 ZDHHC12Q96GR4 267 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 PKP4Q99569 1192 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 NAA11Q9BSU3 229 aaPredicted RBP12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 URM1Q9BTM9 101 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 EVLQ9UI08 416 aaPredicted RBP12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 SETD7Q8WTS6 366 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 LRFN1Q9P244 771 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 FAM170BA6NMN3 283 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 PIAS1O75925 651 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 TDGQ13569 410 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 BTBD16Q32M84 506 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 GALNT12Q8IXK2 581 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 ZNF100Q8IYN0 542 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 GALNT6Q8NCL4 622 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 SMPDL3AQ92484 453 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 TMEM100Q9NV29 134 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 FBXL3Q9UKT7 428 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 PCDHGA6Q9Y5G7 932 aa12.74□□□□□ -0.37
SYNGAP1-208ENST00000629380 A0A1B0GVT2 93 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms