RNA–Protein interactions for RNA: ENST00000628881.1

PFDN5-220, Transcript of prefoldin subunit 5, humanhuman

TSL 3 BASIC

Gene PFDN5, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-220ENST00000628881 ZNF225Q9UK10 706 aa12.88□□□□□ -0.35
PFDN5-220ENST00000628881 G3BP2Q9UN86 482 aaKnown RBP12.88□□□□□ -0.35
PFDN5-220ENST00000628881 PLLPQ9Y342 182 aa12.88□□□□□ -0.35
PFDN5-220ENST00000628881 MED13Q9UHV7 2174 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 IGHV1-45A0A0A0MS14 117 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 NSG1A0A0A6YYJ2 146 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 OR2W5A6NFC9 320 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 A6NL46 340 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 MASP2O00187 686 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 SAP18O00422 153 aaKnown RBP12.87□□□□□ -0.35
PFDN5-220ENST00000628881 RTCAO00442 366 aaKnown RBP12.87□□□□□ -0.35
PFDN5-220ENST00000628881 RGS16O15492 202 aaPredicted RBP12.87□□□□□ -0.35
PFDN5-220ENST00000628881 B4GALT2O60909 372 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 SH3BGRLO75368 114 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 C1QL1O75973 258 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 PRB1P04280 392 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 CPA3P15088 417 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 HIST1H1TP22492 207 aaPredicted RBP12.87□□□□□ -0.35
PFDN5-220ENST00000628881 ATP5A1P25705 553 aaKnown RBP12.87□□□□□ -0.35
PFDN5-220ENST00000628881 SSR2P43308 183 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 TSFMP43897 325 aaKnown RBP12.87□□□□□ -0.35
PFDN5-220ENST00000628881 NEK2P51955 445 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 RAP1GDS1P52306 607 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 RAB38P57729 211 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 DNAJB13P59910 316 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 LCP2Q13094 533 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 IFT88Q13099 833 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 CUL3Q13618 768 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 RCN2Q14257 317 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 PCOLCEQ15113 449 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 AP5B1Q2VPB7 878 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 TTC19Q6DKK2 380 aaPredicted RBP12.87□□□□□ -0.35
PFDN5-220ENST00000628881 ZNF793Q6ZN11 406 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 QSOX2Q6ZRP7 698 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 LANCL3Q6ZV70 420 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 CROCCP2Q86T23 111 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 ARMC2Q8NEN0 867 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 RGMAQ96B86 450 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 ZNF700Q9H0M5 742 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 GSTO2Q9H4Y5 243 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 ELOVL6Q9H5J4 265 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 MLXIPLQ9NP71 852 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 RIC8BQ9NVN3 520 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 OXSMQ9NWU1 459 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 GPR83Q9NYM4 423 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 DAPP1Q9UN19 280 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 TP53TG5Q9Y2B4 290 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 PCDHGB7Q9Y5F8 929 aa12.87□□□□□ -0.35
PFDN5-220ENST00000628881 FAM227AF5H4B4 570 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 K7EM74 188 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 PLPP1O14494 284 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 KLHL41O60662 606 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 SPAG7O75391 227 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 OR4F21O95013 312 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 PGDP52209 483 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 LIM2P55344 173 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 PKNOX1P55347 436 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 MYBPC3Q14896 1274 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 ABRAXAS2Q15018 415 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 NSDHLQ15738 373 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 BEND6Q5SZJ8 279 aaPredicted RBP12.86□□□□□ -0.35
PFDN5-220ENST00000628881 CEP85LQ5SZL2 805 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 LIPMQ5VYY2 423 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 OR4C11Q6IEV9 310 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 LRIG3Q6UXM1 1119 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 GPRIN3Q6ZVF9 776 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 CPEB2Q7Z5Q1 589 aaKnown RBP12.86□□□□□ -0.35
PFDN5-220ENST00000628881 ANKRD37Q7Z713 158 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 ZNF843Q8N446 348 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 CCNYL1Q8N7R7 359 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 ACOT4Q8N9L9 421 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 TSLPQ969D9 159 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 MTFMTQ96DP5 389 aaKnown RBP12.86□□□□□ -0.35
PFDN5-220ENST00000628881 SERPINI1Q99574 410 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 TUBB6Q9BUF5 446 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 NUDT9Q9BW91 350 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 SLC29A3Q9BZD2 475 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 ZNF160Q9HCG1 818 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 LYRM4Q9HD34 91 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 PRDM9Q9NQV7 894 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 ZNF71Q9NQZ8 489 aaPredicted RBP12.86□□□□□ -0.35
PFDN5-220ENST00000628881 SNX6Q9UNH7 406 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 MRPS33Q9Y291 106 aaKnown RBP12.86□□□□□ -0.35
PFDN5-220ENST00000628881 MMACHCQ9Y4U1 282 aa12.86□□□□□ -0.35
PFDN5-220ENST00000628881 H3BQF6 201 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 PRMT3O60678 531 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 SEMA3DO95025 777 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 ETHE1O95571 254 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 PDGFAP04085 211 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 CREB1P16220 341 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 NR1D1P20393 614 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 ITGA3P26006 1051 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 NAGLUP54802 743 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 Q0VFX4 171 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 NFATC3Q12968 1075 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 RAPSNQ13702 412 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 PCLAFQ15004 111 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 CFAP157Q5JU67 520 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 VWA5B1Q5TIE3 1220 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 IRAK1BP1Q5VVH5 260 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms