RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 IDSP22304 550 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 CBSP35520 551 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 PHF19Q5T6S3 580 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 SMARCD3Q6STE5 483 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 SNX29P2Q8IUI4 249 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 C22orf15Q8WYQ4 148 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 PMM1Q92871 262 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 SNAPC3Q92966 411 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 P2RY11Q96G91 374 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 SLC45A3Q96JT2 553 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 COQ10AQ96MF6 247 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 TMED9Q9BVK6 235 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 ZBTB26Q9HCK0 441 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 EQTNQ9NQ60 294 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 ITM2CQ9NQX7 267 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 PAK1IP1Q9NWT1 392 aaPredicted RBP6.94□□□□□ -1.3
COLCA1-205ENST00000620864 SHISA7A6NL88 538 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 E7EQ34 232 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 MITFO75030 526 aaPredicted RBP6.94□□□□□ -1.3
COLCA1-205ENST00000620864 GPR139Q6DWJ6 353 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 RASGRP3Q8IV61 690 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 FOXRED2Q8IWF2 684 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 OR56A1Q8NGH5 318 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 GNPDA2Q8TDQ7 276 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 PEX13Q92968 403 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 SLC38A3Q99624 504 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 EFCAB11Q9BUY7 163 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 SLC25A51Q9H1U9 297 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 LDAHQ9H6V9 325 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 KIAA1210Q9ULL0 1709 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 AGAP14A8MT82 685 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 NEDD8-MDP1E9PL57 170 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 TPPPO94811 219 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 HCKP08631 526 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 FMO1Q01740 532 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 LSAMPQ13449 338 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 KCTD18Q6PI47 426 aaPredicted RBP6.94□□□□□ -1.3
COLCA1-205ENST00000620864 SLC22A25Q6T423 547 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 CCBE1Q6UXH8 406 aaPredicted RBP6.94□□□□□ -1.3
COLCA1-205ENST00000620864 UNQ6126/PRO20091Q6UXV3 157 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 LAS2Q8IYD9 372 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 FTMTQ8N4E7 242 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 SMPDL3BQ92485 455 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 BTN2A3PQ96KV6 586 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 IMP3Q9NV31 184 aaKnown RBP6.94□□□□□ -1.3
COLCA1-205ENST00000620864 FNIP2Q9P278 1114 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 TOR1AO14656 332 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 DENRO43583 198 aaKnown RBP6.94□□□□□ -1.3
COLCA1-205ENST00000620864 ENSAO43768 121 aaKnown RBP6.94□□□□□ -1.3
COLCA1-205ENST00000620864 RASAL1O95294 804 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 OR8U9P0C7N5 309 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 ZDHHC11BP0C7U3 371 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 RIN1Q13671 783 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 ATP6AP1Q15904 470 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 DUOXA1Q1HG43 343 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 NIPAL3Q6P499 406 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 PET117Q6UWS5 81 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 TRIM46Q7Z4K8 759 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 ZNF619Q8N2I2 560 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 VWA5B2Q8N398 1253 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 METTL4Q8N3J2 472 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 C3orf58Q8NDZ4 430 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 ZNF486Q96H40 463 aaPredicted RBP6.94□□□□□ -1.3
COLCA1-205ENST00000620864 NT5DC2Q9H857 520 aa6.94□□□□□ -1.3
COLCA1-205ENST00000620864 PRAMEF2O60811 474 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 CRYBA1P05813 215 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 S1PR1P21453 382 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 CTSOP43234 321 aaPredicted RBP6.93□□□□□ -1.3
COLCA1-205ENST00000620864 GALEQ14376 348 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 SF1Q15637 639 aaKnown RBP6.93□□□□□ -1.3
COLCA1-205ENST00000620864 SCIMPQ6UWF3 145 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 OTOP3Q7RTS5 596 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 DPCDQ9BVM2 203 aaPredicted RBP6.93□□□□□ -1.3
COLCA1-205ENST00000620864 SAMD10Q9BYL1 202 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 PPIL3Q9H2H8 161 aaKnown RBP6.93□□□□□ -1.3
COLCA1-205ENST00000620864 MYH3P11055 1940 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 MEIS2O14770 477 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 CNTN5O94779 1100 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 CTHP32929 405 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 NSG1P42857 185 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 RAB4BP61018 213 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 SNTB2Q13425 540 aaKnown RBP6.93□□□□□ -1.3
COLCA1-205ENST00000620864 SGCBQ16585 318 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 C4orf17Q53FE4 359 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 SMYD5Q6GMV2 418 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 KIAA0930Q6ICG6 404 aaPredicted RBP6.93□□□□□ -1.3
COLCA1-205ENST00000620864 SMIM15Q7Z3B0 74 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 NOXA1Q86UR1 476 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 MS4A15Q8N5U1 240 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 SAMD12Q8N8I0 201 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 NEIL3Q8TAT5 605 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 ZNF675Q8TD23 568 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 SLCO2A1Q92959 643 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 CSPG4P5Q96PW8 444 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 ADAM7Q9H2U9 754 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 GPN2Q9H9Y4 310 aaPredicted RBP6.93□□□□□ -1.3
COLCA1-205ENST00000620864 TRAV6A0A075B6T7 132 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 FZD9O00144 591 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 BHLHE40O14503 412 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 LILRB5O75023 590 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms