RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 TUBB4BP68371 445 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 HSD11B2P80365 405 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 TIAL1Q01085 375 aaKnown RBP eCLIP4.38□□□□□ -1.71
CUL3-216ENST00000617432 RAPSNQ13702 412 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 TUBB2AQ13885 445 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 IL11RAQ14626 422 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 TYSND1Q2T9J0 566 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 ANKRD20A4Q4UJ75 823 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 RBM20Q5T481 1227 aaKnown RBP4.38□□□□□ -1.71
CUL3-216ENST00000617432 RNASEH2BQ5TBB1 312 aaKnown RBP4.38□□□□□ -1.71
CUL3-216ENST00000617432 FCRL6Q6DN72 434 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 ZNF470Q6ECI4 717 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 PTRHD1Q6GMV3 140 aaKnown RBP4.38□□□□□ -1.71
CUL3-216ENST00000617432 CASC4Q6P4E1 433 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 SPESP1Q6UW49 350 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 MBOAT1Q6ZNC8 495 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 MED25Q71SY5 747 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 KLHL7Q8IXQ5 586 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 SLC22A15Q8IZD6 547 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 CNPY4Q8N129 248 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 ESX1Q8N693 406 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 ENDOVQ8N8Q3 282 aaKnown RBP4.38□□□□□ -1.71
CUL3-216ENST00000617432 NAT8LQ8N9F0 302 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 OR5K2Q8NHB8 316 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 HEXDCQ8WVB3 486 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 MR1Q95460 341 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 TEFMQ96QE5 360 aaKnown RBP4.38□□□□□ -1.71
CUL3-216ENST00000617432 CD180Q99467 661 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 TUBB2BQ9BVA1 445 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 B3GNT4Q9C0J1 378 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 TFB2MQ9H5Q4 396 aaKnown RBP4.38□□□□□ -1.71
CUL3-216ENST00000617432 MVB12BQ9H7P6 319 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 SLC22A11Q9NSA0 550 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 ABCF3Q9NUQ8 709 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 LUZP4Q9P127 313 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 IKZF3Q9UKT9 509 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 RIMKLBQ9ULI2 386 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 SH2B3Q9UQQ2 575 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 TP53TG5Q9Y2B4 290 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 JRKLQ9Y4A0 524 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 COLEC10Q9Y6Z7 277 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 BOD1L1Q8NFC6 3051 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 BAHCC1Q9P281 2608 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 TENM4Q6N022 2769 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 GCN1Q92616 2671 aaKnown RBP4.37□□□□□ -1.71
CUL3-216ENST00000617432 IGKV1-8A0A0C4DH67 115 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 A0A0J9YY10 115 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 ARGFXA6NJG6 315 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 C2orf74A8MZ97 194 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 DNALI1O14645 258 aaPredicted RBP4.37□□□□□ -1.71
CUL3-216ENST00000617432 RASGRF2O14827 1237 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 TTI1O43156 1089 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 CTSVO60911 334 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 NDUFS3O75489 264 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 CREG1O75629 220 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 HAUS5O94927 633 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 SLCO2B1O94956 709 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 C1orf105O95561 183 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 GAS8O95995 478 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 ELANEP08246 267 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 ERVK-10P10266 1014 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 RPS3P23396 243 aaKnown RBP eCLIP4.37□□□□□ -1.71
CUL3-216ENST00000617432 IVDP26440 423 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 GABRB3P28472 473 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 SHMT2P34897 504 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 CD151P48509 253 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 NPY2RP49146 381 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 EFNA3P52797 238 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 ACY1Q03154 408 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 PRKAA1Q13131 559 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 RPA4Q13156 261 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 DHX34Q14147 1143 aaKnown RBP4.37□□□□□ -1.71
CUL3-216ENST00000617432 GBX1Q14549 363 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 FASTKD3Q14CZ7 662 aaKnown RBP4.37□□□□□ -1.71
CUL3-216ENST00000617432 IGFBP7Q16270 282 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 KYNUQ16719 465 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 KLHL38Q2WGJ6 581 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 PRR30Q53SZ7 412 aaPredicted RBP4.37□□□□□ -1.71
CUL3-216ENST00000617432 UBAP2Q5T6F2 1119 aaKnown RBP4.37□□□□□ -1.71
CUL3-216ENST00000617432 IZUMO3Q5VZ72 239 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 B3GNTL1Q67FW5 361 aaPredicted RBP4.37□□□□□ -1.71
CUL3-216ENST00000617432 KIAA0930Q6ICG6 404 aaPredicted RBP4.37□□□□□ -1.71
CUL3-216ENST00000617432 FRMPD2BQ6IN97 320 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 SUSD1Q6UWL2 747 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 SHISA6Q6ZSJ9 500 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 COX15Q7KZN9 410 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 PIWIL4Q7Z3Z4 852 aaKnown RBP4.37□□□□□ -1.71
CUL3-216ENST00000617432 JAZF1Q86VZ6 243 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 DCUN1D3Q8IWE4 304 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 CPNE9Q8IYJ1 553 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 SYTL1Q8IYJ3 562 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 TBC1D21Q8IYX1 336 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 DSELQ8IZU8 1212 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 DNAJC22Q8N4W6 341 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 ZNF610Q8N9Z0 462 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 ACTRT1Q8TDG2 376 aa4.37□□□□□ -1.71
CUL3-216ENST00000617432 SKA2Q8WVK7 121 aaPredicted RBP4.37□□□□□ -1.71
CUL3-216ENST00000617432 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.37□□□□□ -1.712e-7■■■■■ 62.8
CUL3-216ENST00000617432 KIAA1143Q96AT1 154 aaPredicted RBP4.37□□□□□ -1.71
CUL3-216ENST00000617432 LRRC45Q96CN5 670 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms