RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 PEX1O43933 1283 aa19.36■□□□□ 0.69
TRAPPC3-208ENST00000616074 HS6ST1O60243 411 aa19.36■□□□□ 0.69
TRAPPC3-208ENST00000616074 PRKNO60260 465 aaPredicted RBP19.36■□□□□ 0.69
TRAPPC3-208ENST00000616074 H2AFYO75367 372 aaKnown RBP19.36■□□□□ 0.69
TRAPPC3-208ENST00000616074 TBX6O95947 436 aaPredicted RBP19.36■□□□□ 0.69
TRAPPC3-208ENST00000616074 NCF1P14598 390 aaPredicted RBP19.36■□□□□ 0.69
TRAPPC3-208ENST00000616074 GPR143P51810 404 aa19.36■□□□□ 0.69
TRAPPC3-208ENST00000616074 RAB38P57729 211 aa19.36■□□□□ 0.69
TRAPPC3-208ENST00000616074 GPR85P60893 370 aa19.36■□□□□ 0.69
TRAPPC3-208ENST00000616074 PDIA2Q13087 525 aaKnown RBP19.36■□□□□ 0.69
TRAPPC3-208ENST00000616074 MDGA2Q7Z553 956 aa19.36■□□□□ 0.69
TRAPPC3-208ENST00000616074 FAM47BQ8NA70 645 aa19.36■□□□□ 0.69
TRAPPC3-208ENST00000616074 TTLQ8NG68 377 aa19.36■□□□□ 0.69
TRAPPC3-208ENST00000616074 QRFPRQ96P65 431 aa19.36■□□□□ 0.69
TRAPPC3-208ENST00000616074 MCMBPQ9BTE3 642 aa19.36■□□□□ 0.69
TRAPPC3-208ENST00000616074 TRIM31Q9BZY9 425 aa19.36■□□□□ 0.69
TRAPPC3-208ENST00000616074 PPT2Q9UMR5 302 aa19.36■□□□□ 0.69
TRAPPC3-208ENST00000616074 CDC40O60508 579 aaKnown RBP eCLIP19.35■□□□□ 0.69
TRAPPC3-208ENST00000616074 TPOP07202 933 aa19.35■□□□□ 0.69
TRAPPC3-208ENST00000616074 TFEBP19484 476 aa19.35■□□□□ 0.69
TRAPPC3-208ENST00000616074 SSTR2P30874 369 aa19.35■□□□□ 0.69
TRAPPC3-208ENST00000616074 PTGS2P35354 604 aa19.35■□□□□ 0.69
TRAPPC3-208ENST00000616074 HSD17B7P56937 341 aa19.35■□□□□ 0.69
TRAPPC3-208ENST00000616074 SLC13A2Q13183 592 aa19.35■□□□□ 0.69
TRAPPC3-208ENST00000616074 CMPK2Q5EBM0 449 aa19.35■□□□□ 0.69
TRAPPC3-208ENST00000616074 CD163Q86VB7 1156 aa19.35■□□□□ 0.69
TRAPPC3-208ENST00000616074 CREG2Q8IUH2 290 aa19.35■□□□□ 0.69
TRAPPC3-208ENST00000616074 EID3Q8N140 333 aa19.35■□□□□ 0.69
TRAPPC3-208ENST00000616074 C16orf52Q8NHV5 167 aa19.35■□□□□ 0.69
TRAPPC3-208ENST00000616074 FAM57AQ8TBR7 257 aa19.35■□□□□ 0.69
TRAPPC3-208ENST00000616074 SDCCAG3Q96C92 435 aa19.35■□□□□ 0.69
TRAPPC3-208ENST00000616074 VPS39Q96JC1 886 aa19.35■□□□□ 0.69
TRAPPC3-208ENST00000616074 RUNDC3BQ96NL0 473 aa19.35■□□□□ 0.69
TRAPPC3-208ENST00000616074 TMEM79Q9BSE2 394 aa19.35■□□□□ 0.69
TRAPPC3-208ENST00000616074 RHOJQ9H4E5 214 aa19.35■□□□□ 0.69
TRAPPC3-208ENST00000616074 POPDC3Q9HBV1 291 aa19.35■□□□□ 0.69
TRAPPC3-208ENST00000616074 F8P00451 2351 aa19.34■□□□□ 0.69
TRAPPC3-208ENST00000616074 E7ESA3 106 aa19.34■□□□□ 0.69
TRAPPC3-208ENST00000616074 B3GALT2O43825 422 aa19.34■□□□□ 0.69
TRAPPC3-208ENST00000616074 PIAS1O75925 651 aa19.34■□□□□ 0.69
TRAPPC3-208ENST00000616074 GSTM2P28161 218 aa19.34■□□□□ 0.69
TRAPPC3-208ENST00000616074 SSR4P51571 173 aa19.34■□□□□ 0.69
TRAPPC3-208ENST00000616074 PLA2G16P53816 162 aa19.34■□□□□ 0.69
TRAPPC3-208ENST00000616074 KRTAP10-9P60411 292 aa19.34■□□□□ 0.69
TRAPPC3-208ENST00000616074 TGFBIQ15582 683 aa19.34■□□□□ 0.69
TRAPPC3-208ENST00000616074 ADPRMQ3LIE5 342 aa19.34■□□□□ 0.69
TRAPPC3-208ENST00000616074 ADNP2Q6IQ32 1131 aa19.34■□□□□ 0.69
TRAPPC3-208ENST00000616074 C16orf47Q6ZP98 133 aaPredicted RBP19.34■□□□□ 0.69
TRAPPC3-208ENST00000616074 VN1R5Q7Z5H4 357 aa19.34■□□□□ 0.69
TRAPPC3-208ENST00000616074 CLNKQ7Z7G1 428 aa19.34■□□□□ 0.69
TRAPPC3-208ENST00000616074 KRT78Q8N1N4 520 aa19.34■□□□□ 0.69
TRAPPC3-208ENST00000616074 SPATA6LQ8N4H0 392 aa19.34■□□□□ 0.69
TRAPPC3-208ENST00000616074 MARVELD2Q8N4S9 558 aa19.34■□□□□ 0.69
TRAPPC3-208ENST00000616074 ZFP62Q8NB50 900 aaPredicted RBP19.34■□□□□ 0.69
TRAPPC3-208ENST00000616074 CA5BP1Q8WTZ4 195 aa19.34■□□□□ 0.69
TRAPPC3-208ENST00000616074 CSF3RQ99062 836 aa19.34■□□□□ 0.69
TRAPPC3-208ENST00000616074 CCDC77Q9BR77 488 aa19.34■□□□□ 0.69
TRAPPC3-208ENST00000616074 KCNF1Q9H3M0 494 aa19.34■□□□□ 0.69
TRAPPC3-208ENST00000616074 NT5DC2Q9H857 520 aa19.34■□□□□ 0.69
TRAPPC3-208ENST00000616074 SMYD2Q9NRG4 433 aa19.34■□□□□ 0.69
TRAPPC3-208ENST00000616074 HRH3Q9Y5N1 445 aa19.34■□□□□ 0.69
TRAPPC3-208ENST00000616074 CCDC168Q8NDH2 2452 aa19.34■□□□□ 0.69
TRAPPC3-208ENST00000616074 A0A088AWK7 358 aa19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 TMEM200CA6NKL6 621 aa19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 CLDN4O14493 209 aa19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 TAPBPO15533 448 aa19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 PRAMEF4O60810 478 aa19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 CLEC3AO75596 197 aa19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 WISP3O95389 354 aaPredicted RBP19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 ZNF10P21506 573 aaPredicted RBP19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 CERS1P27544 350 aa19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 FBXO48Q5FWF7 155 aa19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 PRAMEF9Q5VWM5 478 aa19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 CAPN12Q6ZSI9 719 aa19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 ZNF595Q8IYB9 648 aa19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 OR2L5Q8NG80 312 aa19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 OR52N2Q8NGI0 321 aa19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 SEC16BQ96JE7 1060 aa19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 SPOCK3Q9BQ16 436 aa19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 DERL2Q9GZP9 239 aa19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 REXO4Q9GZR2 422 aaKnown RBP19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 ENKD1Q9H0I2 346 aa19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 CAB39LQ9H9S4 337 aa19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 LIN28AQ9H9Z2 209 aaKnown RBP19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 ADAP2Q9NPF8 381 aa19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 DEPPQ9NTK1 212 aa19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 NSMCE4AQ9NXX6 385 aa19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 WWOXQ9NZC7 414 aa19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 GPRC5BQ9NZH0 403 aa19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 COQ3Q9NZJ6 369 aa19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 KCMF1Q9P0J7 381 aa19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 MRPS33Q9Y291 106 aaKnown RBP19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 YARS2Q9Y2Z4 477 aaKnown RBP19.33■□□□□ 0.68
TRAPPC3-208ENST00000616074 ANKDD1BA6NHY2 528 aa19.32■□□□□ 0.68
TRAPPC3-208ENST00000616074 CYR61O00622 381 aa19.32■□□□□ 0.68
TRAPPC3-208ENST00000616074 ZFAND5O76080 213 aa19.32■□□□□ 0.68
TRAPPC3-208ENST00000616074 NR0B1P51843 470 aaKnown RBP19.32■□□□□ 0.68
TRAPPC3-208ENST00000616074 SLC12A2P55011 1212 aa19.32■□□□□ 0.68
TRAPPC3-208ENST00000616074 LIM2P55344 173 aa19.32■□□□□ 0.68
TRAPPC3-208ENST00000616074 TRIM40Q6P9F5 258 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms