RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 PCDHGB6Q9Y5F9 930 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 PCDHGA2Q9Y5H1 932 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 SNX11Q9Y5W9 270 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 BACE2Q9Y5Z0 518 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 HSPE1-MOB4S4R3N1 261 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 HOXA2O43364 376 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 SSTR4P31391 388 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 PRKAG1P54619 331 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 VEZF1Q14119 521 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 MICAQ29983 383 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 MPEG1Q2M385 716 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 NXNL2Q5VZ03 156 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 YIPF4Q9BSR8 244 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 PRRG3Q9BZD7 231 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 SPG21Q9NZD8 308 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 WNT6Q9Y6F9 365 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 AGAP14A8MT82 685 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 COQ9O75208 318 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 ENTPD6O75354 484 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 SEMG1P04279 462 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 IL1RNP18510 177 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 TLE2Q04725 743 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 BCL7AQ4VC05 210 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 CCDC92Q53HC0 331 aaPredicted RBP13.45□□□□□ -0.26
COL6A1-207ENST00000612273 STARD8Q92502 1023 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 VOPP1Q96AW1 172 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 FOPNLQ96NB1 174 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 COL21A1Q96P44 957 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 SMAD5Q99717 465 aaKnown RBP13.45□□□□□ -0.26
COL6A1-207ENST00000612273 WFDC6Q9BQY6 131 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 SRRDQ9UH36 339 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 ERVW-1Q9UQF0 538 aa13.45□□□□□ -0.26
COL6A1-207ENST00000612273 A0A1W2PRB8 838 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 TTC36A6NLP5 189 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 PDZK1P1A8MUH7 402 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 C5orf58C9J3I9 102 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 ARHGAP33O14559 1287 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 CSF2P04141 144 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 CHMP24386 653 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 CCR2P41597 374 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 CDC42P60953 191 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 DMPKQ09013 629 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 SPDYE7PQ495Y7 208 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 LY6G5CQ5SRR4 150 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 CEACAM20Q6UY09 585 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 EPYCQ99645 322 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 TMEM175Q9BSA9 504 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 PRR14Q9BWN1 585 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 TP63Q9H3D4 680 aaPredicted RBP13.44□□□□□ -0.26
COL6A1-207ENST00000612273 NMNAT1Q9HAN9 279 aaPredicted RBP13.44□□□□□ -0.26
COL6A1-207ENST00000612273 MALT1Q9UDY8 824 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 SPEGQ15772 3267 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 GLOD5A6NK44 160 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 TGM5O43548 720 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 ELFN1P0C7U0 828 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 DEFB103AP81534 67 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 MRPS15P82914 257 aaKnown RBP13.44□□□□□ -0.26
COL6A1-207ENST00000612273 TBCEQ15813 527 aaPredicted RBP13.44□□□□□ -0.26
COL6A1-207ENST00000612273 LRIT3Q3SXY7 679 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 PLEKHS1Q5SXH7 462 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 LIPKQ5VXJ0 399 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 NRARPQ7Z6K4 114 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 KBTBD8Q8NFY9 601 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 EXOSC8Q96B26 276 aaKnown RBP13.44□□□□□ -0.26
COL6A1-207ENST00000612273 ZNF558Q96NG5 402 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 PITX2Q99697 317 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 MACROD1Q9BQ69 325 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 REEP4Q9H6H4 257 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 ABCB9Q9NP78 766 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 ACER3Q9NUN7 267 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 TOR4AQ9NXH8 423 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 ANTXRLA6NF34 631 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 EFCAB10A6NFE3 127 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 KMOO15229 486 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 CCNB2O95067 398 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 APOA1P02647 267 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 KRT8P05787 483 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 TYRP14679 529 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 MVDP53602 400 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 ZNF763Q0D2J5 394 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 ANXA8L1Q5VT79 327 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 TMEM215Q68D42 235 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 BRAT1Q6PJG6 821 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 TMIGD1Q6UXZ0 262 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 SHFQ7M4L6 423 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 FAM20CQ8IXL6 584 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 TCEANCQ8N8B7 351 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 ING5Q8WYH8 240 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 UCN3Q969E3 161 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 SLC6A16Q9GZN6 736 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 TVP23BQ9NYZ1 205 aa13.44□□□□□ -0.26
COL6A1-207ENST00000612273 GPX5O75715 221 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 C8AP07357 584 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 ANXA8P13928 327 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 PCGF2P35227 344 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 SOX6P35712 828 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 UGT2B15P54855 530 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 ADCK2Q7Z695 626 aa13.43□□□□□ -0.26
COL6A1-207ENST00000612273 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.43□□□□□ -0.26
COL6A1-207ENST00000612273 CAMKK1Q8N5S9 505 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms