RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 CCND1P24385 295 aa14.24□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 DNASE1L1P49184 302 aa14.24□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 CCR8P51685 355 aa14.24□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 CLCN7P51798 805 aa14.24□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 XKR6Q5GH73 641 aa14.24□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 LCTLQ6UWM7 567 aa14.24□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 CXorf67Q86X51 503 aaPredicted RBP14.24□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 LIX1Q8N485 282 aa14.24□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 NAXEQ8NCW5 288 aa14.24□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 TNIP2Q8NFZ5 429 aa14.24□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 SLC30A3Q99726 388 aa14.24□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 AARSD1Q9BTE6 412 aaKnown RBP14.24□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 TUBA8Q9NY65 449 aaPredicted RBP14.24□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 SPRR3Q9UBC9 169 aa14.24□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 MMACHCQ9Y4U1 282 aa14.24□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 CSPG4Q6UVK1 2322 aa14.23□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 AP3B1O00203 1094 aa14.23□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 BMP7P18075 431 aa14.23□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 OGNP20774 298 aaKnown RBP14.23□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 HNF4AP41235 474 aa14.23□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 RAB8AP61006 207 aa14.23□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 SORDQ00796 357 aa14.23□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 KLF1Q13351 362 aaPredicted RBP14.23□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 NAE1Q13564 534 aa14.23□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 BMPR2Q13873 1038 aa14.23□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 HYAL4Q2M3T9 481 aa14.23□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 AGTRAPQ6RW13 159 aa14.23□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 CES3Q6UWW8 571 aa14.23□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 UBL4BQ8N7F7 174 aa14.23□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 CCDC89Q8N998 374 aa14.23□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 GOLM1Q8NBJ4 401 aa14.23□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 SREK1Q8WXA9 508 aaKnown RBP14.23□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 PIGTQ969N2 578 aa14.23□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 MFSD3Q96ES6 412 aa14.23□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 SCYL1Q96KG9 808 aa14.23□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 CAPZA3Q96KX2 299 aa14.23□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 SGCZQ96LD1 299 aa14.23□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 HAUS8Q9BT25 410 aa14.23□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 TRPS1Q9UHF7 1281 aa14.23□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 PPIEQ9UNP9 301 aaKnown RBP14.23□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 ZNF148Q9UQR1 794 aa14.23□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 EEF1E1-BLOC1S5C9J1V9 151 aa14.22□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 AKR1B15C9JRZ8 316 aaPredicted RBP14.22□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 EEF1E1O43324 174 aaKnown RBP14.22□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 HRGP04196 525 aa14.22□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 ENDOUP21128 410 aaKnown RBP14.22□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 ARNTP27540 789 aa14.22□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 NPY2RP49146 381 aa14.22□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 FOXO1Q12778 655 aa14.22□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 HSDL2Q6YN16 418 aa14.22□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 SEM1Q6ZVN7 128 aa14.22□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 YTHDF3Q7Z739 585 aaKnown RBP14.22□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 LACC1Q8IV20 430 aa14.22□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 PALM2Q8IXS6 379 aa14.22□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 NT5CQ8TCD5 201 aa14.22□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 UTP15Q8TED0 518 aaKnown RBP14.22□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 ATG4AQ8WYN0 398 aa14.22□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 SECISBP2Q96T21 854 aaKnown RBP14.22□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 INTS10Q9NVR2 710 aaKnown RBP14.22□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 KLHL42Q9P2K6 505 aa14.22□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 CLCA3PQ9Y6N3 262 aa14.22□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 ZNF407Q9C0G0 2248 aa14.22□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 TRBC2A0A5B9 178 aa14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 SYCE3A1L190 88 aa14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 CTAGE9A4FU28 777 aa14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 AHRRA9YTQ3 701 aa14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 CLDN4O14493 209 aa14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 CASKO14936 926 aa14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 EPPINO95925 133 aa14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 PAMP19021 973 aa14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 CEACAM8P31997 349 aaPredicted RBP14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 TIMP3P35625 211 aa14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 GPR143P51810 404 aa14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 SLC13A2Q13183 592 aa14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 CBLBQ13191 982 aa14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 SF3B4Q15427 424 aaKnown RBP eCLIP14.21□□□□□ -0.132e-6■■■■□ 23
NEDD8-MDP1-204ENST00000605847 SIX1Q15475 284 aaPredicted RBP14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 OPN5Q6U736 354 aa14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 PRSS57Q6UWY2 283 aa14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 CYHR1Q6ZMK1 362 aa14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 PIWIL4Q7Z3Z4 852 aaKnown RBP14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 VSTM4Q8IW00 320 aa14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 TMEM132CQ8N3T6 1108 aa14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 GIMAP7Q8NHV1 300 aa14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 KCNJ9Q92806 393 aa14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 KIAA1191Q96A73 305 aa14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 HSPBAP1Q96EW2 488 aa14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 PIP5K1AQ99755 562 aa14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 ADAP2Q9NPF8 381 aa14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 PRTFDC1Q9NRG1 225 aa14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 TRMT1Q9NXH9 659 aaKnown RBP14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 PAK5Q9P286 719 aa14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 ZFP69BQ9UJL9 534 aa14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 AMFRQ9UKV5 643 aa14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 EIF3LQ9Y262 564 aaKnown RBP14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 ATG4BQ9Y4P1 393 aa14.21□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 PABPN1LA6NDY0 278 aaKnown RBP14.2□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 TRIM64A6NGJ6 449 aa14.2□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 TRIM64BA6NI03 449 aa14.2□□□□□ -0.14
NEDD8-MDP1-204ENST00000605847 CRLF1O75462 422 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms