RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 AASDHQ4L235 1098 aaPredicted RBP4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 EPHA10Q5JZY3 1008 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 MARCH8Q5T0T0 291 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 WSCD1Q658N2 575 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 SLFN12LQ6IEE8 588 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 SLCO4C1Q6ZQN7 724 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 TMEM26Q6ZUK4 368 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 C4orf33Q8N1A6 199 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 UBL4BQ8N7F7 174 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 OR6F1Q8NGZ6 308 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 TSEN15Q8WW01 171 aaKnown RBP4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 HTR3CQ8WXA8 447 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 GTF2H4Q92759 462 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 TMEM186Q96B77 213 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 CMTM5Q96DZ9 223 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 DCUN1D1Q96GG9 259 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 ZNF668Q96K58 619 aaPredicted RBP4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 FMO2Q99518 471 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 PTPN18Q99952 460 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 ZNF251Q9BRH9 671 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 NUDT22Q9BRQ3 303 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 SLC12A9Q9BXP2 914 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 S1PR5Q9H228 398 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 MTIF3Q9H2K0 278 aaKnown RBP4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 RANBP3Q9H6Z4 567 aaPredicted RBP4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 CALHM2Q9HA72 323 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 RAB18Q9NP72 206 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 CNNM1Q9NRU3 951 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 HAO2Q9NYQ3 351 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 ERVK-18Q9QC07 812 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 GLS2Q9UI32 602 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 SAMHD1Q9Y3Z3 626 aaKnown RBP4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 MFHAS1Q9Y4C4 1052 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 KDM3BQ7LBC6 1761 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 ABCB11O95342 1321 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 LAMA4Q16363 1823 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 LOC102723996A0A087X1L8 192 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 CCDC188H7C350 402 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 KIAA0391O15091 583 aaKnown RBP4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 LIASO43766 372 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 KDM4BO94953 1096 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 H6PDO95479 791 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 CDK1P06493 297 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 EBLN1P0CF75 366 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 RNF224P0DH78 156 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 ITGA4P13612 1032 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 ZNF26P17031 533 aaPredicted RBP4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 CSF2RBP32927 897 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 DDOSTP39656 456 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 CDH15P55291 814 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 RPS8P62241 208 aaKnown RBP4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 SLC39A6Q13433 755 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 MOGAT2Q3SYC2 334 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 TEX44Q53QW1 395 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 RUNDC3AQ59EK9 446 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 SPANXN2Q5MJ10 180 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 RABGAP1LQ5R372 815 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 ATAD3CQ5T2N8 411 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 LPCAT4Q643R3 524 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 TMEM198Q66K66 360 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 KRT40Q6A162 431 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 ZNF544Q6NX49 715 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 DCUN1D2Q6PH85 259 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 VSTM1Q6UX27 236 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 TMPRSS6Q8IU80 811 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 CYP4Z2PQ8N1L4 340 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 OR4K14Q8NGD5 310 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 PIGKQ92643 395 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 NXNL1Q96CM4 212 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 ARHGEF26Q96DR7 871 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 SERPINB11Q96P15 392 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 GSN-AS1Q9NRJ2 163 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 SMOXQ9NWM0 555 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 ING3Q9NXR8 418 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 MPP6Q9NZW5 540 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 CCDC59Q9P031 241 aaKnown RBP4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 RAB23Q9ULC3 237 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 CNTN6Q9UQ52 1028 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 POFUT2Q9Y2G5 429 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 NR2E1Q9Y466 385 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 TMEM184BQ9Y519 407 aaPredicted RBP4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 PTGDR2Q9Y5Y4 395 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 ZNF646O15015 1829 aaPredicted RBP4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 A0A0G2JLW4 131 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 KLF18A0A0U1RQI7 1052 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 WIPF3A6NGB9 483 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 LOC110117498-PIK3R3F6TDL0 507 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 H3BNH8 94 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 M0QYT0 321 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 AURKAO14965 403 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 PJA2O43164 708 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 SEC14L5O43304 696 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 GPR32O75388 356 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 ABHD16AO95870 558 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 EPOP01588 193 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 STK19P49842 368 aaPredicted RBP4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 ERVK-8P63133 956 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 IL9RQ01113 521 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 PDK2Q15119 407 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 TRIP10Q15642 601 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms