RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 TNFRSF1BP20333 461 aa12.68□□□□□ -0.38
VRK3-209ENST00000594948 ITGB7P26010 798 aa12.68□□□□□ -0.38
VRK3-209ENST00000594948 RORCP51449 518 aa12.68□□□□□ -0.38
VRK3-209ENST00000594948 NKX2-5P52952 324 aaPredicted RBP12.68□□□□□ -0.38
VRK3-209ENST00000594948 HBA1P69905 142 aa12.68□□□□□ -0.38
VRK3-209ENST00000594948 CLPPQ16740 277 aaPredicted RBP12.68□□□□□ -0.38
VRK3-209ENST00000594948 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.68□□□□□ -0.38
VRK3-209ENST00000594948 CST9Q5W186 159 aa12.68□□□□□ -0.38
VRK3-209ENST00000594948 ZNF770Q6IQ21 691 aaPredicted RBP12.68□□□□□ -0.38
VRK3-209ENST00000594948 RGMBQ6NW40 437 aa12.68□□□□□ -0.38
VRK3-209ENST00000594948 C22orf39Q6P5X5 142 aa12.68□□□□□ -0.38
VRK3-209ENST00000594948 KLHL17Q6TDP4 642 aa12.68□□□□□ -0.38
VRK3-209ENST00000594948 SERPINA13PQ6UXR4 307 aa12.68□□□□□ -0.38
VRK3-209ENST00000594948 ZNF517Q6ZMY9 492 aaPredicted RBP12.68□□□□□ -0.38
VRK3-209ENST00000594948 RFLNAQ6ZTI6 216 aa12.68□□□□□ -0.38
VRK3-209ENST00000594948 SPATC1Q76KD6 591 aa12.68□□□□□ -0.38
VRK3-209ENST00000594948 SAPCD2Q86UD0 394 aa12.68□□□□□ -0.38
VRK3-209ENST00000594948 OR52J3Q8NH60 311 aa12.68□□□□□ -0.38
VRK3-209ENST00000594948 C17orf50Q8WW18 174 aa12.68□□□□□ -0.38
VRK3-209ENST00000594948 OR4K3Q96R72 315 aa12.68□□□□□ -0.38
VRK3-209ENST00000594948 TSEN34Q9BSV6 310 aaKnown RBP12.68□□□□□ -0.38
VRK3-209ENST00000594948 MIR1-1HGQ9H1L0 117 aa12.68□□□□□ -0.38
VRK3-209ENST00000594948 MYNNQ9NPC7 610 aa12.68□□□□□ -0.38
VRK3-209ENST00000594948 MBD1Q9UIS9 605 aaPredicted RBP12.68□□□□□ -0.38
VRK3-209ENST00000594948 STUB1Q9UNE7 303 aa12.68□□□□□ -0.38
VRK3-209ENST00000594948 HS3ST2Q9Y278 367 aa12.68□□□□□ -0.38
VRK3-209ENST00000594948 NOX1Q9Y5S8 564 aa12.68□□□□□ -0.38
VRK3-209ENST00000594948 NUP210Q8TEM1 1887 aaPredicted RBP12.67□□□□□ -0.38
VRK3-209ENST00000594948 MTCL1Q9Y4B5 1905 aaKnown RBP12.67□□□□□ -0.38
VRK3-209ENST00000594948 GNG14A0A1W2PPG7 69 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 ZNF670-ZNF695F2Z2N8 137 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 FURINP09958 794 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 MAGP20916 626 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 OR1E2P47887 323 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 CYP4F2P78329 520 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 PSPHP78330 225 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 NAE1Q13564 534 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 MED27Q6P2C8 311 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 TMPRSS11AQ6ZMR5 421 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 HTR3DQ70Z44 454 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 VN1R5Q7Z5H4 357 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 DNAJB7Q7Z6W7 309 aaPredicted RBP12.67□□□□□ -0.38
VRK3-209ENST00000594948 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.67□□□□□ -0.38
VRK3-209ENST00000594948 LAS2Q8IYD9 372 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 Q8N9G6 341 aaPredicted RBP12.67□□□□□ -0.38
VRK3-209ENST00000594948 AQP11Q8NBQ7 271 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 HUS1BQ8NHY5 278 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 ASB15Q8WXK1 588 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 KLHL6Q8WZ60 621 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 TMEM80Q96HE8 168 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 VPS35Q96QK1 796 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 KCNS3Q9BQ31 491 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 TMEM245Q9H330 911 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 NMNAT1Q9HAN9 279 aaPredicted RBP12.67□□□□□ -0.38
VRK3-209ENST00000594948 TAS2R9Q9NYW1 312 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 TMEM98Q9Y2Y6 226 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 V9GYH0 126 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 PRAMEF33A0A0G2JMD5 474 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 SEC14L5O43304 696 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 PRAMEF10O60809 474 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 POP4O95707 220 aaKnown RBP12.67□□□□□ -0.38
VRK3-209ENST00000594948 C6orf47O95873 294 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 LGI1O95970 557 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 IFNW1P05000 195 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 ADRA2AP08913 450 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 OSMP13725 252 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 PRKAR2AP13861 404 aaKnown RBP12.67□□□□□ -0.38
VRK3-209ENST00000594948 CNR2P34972 360 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 POLR2LP62875 67 aaKnown RBP12.67□□□□□ -0.38
VRK3-209ENST00000594948 ILKQ13418 452 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 SF1Q15637 639 aaKnown RBP12.67□□□□□ -0.38
VRK3-209ENST00000594948 ZFP69Q49AA0 526 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 C12orf73Q69YU5 71 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 ZNF852Q6ZMS4 543 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 SLCO4C1Q6ZQN7 724 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 OR8H2Q8N162 312 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 FBXO15Q8NCQ5 510 aaPredicted RBP12.67□□□□□ -0.38
VRK3-209ENST00000594948 DBF4BQ8NFT6 615 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 PPCDCQ96CD2 204 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 ST6GAL2Q96JF0 529 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 LMLNQ96KR4 655 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 SLC22A12Q96S37 553 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 SYT17Q9BSW7 474 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 MND1Q9BWT6 205 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 SRRQ9GZT4 340 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 RC3H2Q9HBD1 1191 aaKnown RBP12.67□□□□□ -0.38
VRK3-209ENST00000594948 NDUFB11Q9NX14 153 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 ERVK13-1Q9NX77 482 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 TAS2R16Q9NYV7 291 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 B4GALT6Q9UBX8 382 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 MGAT4BQ9UQ53 548 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 KIAA1549LQ6ZVL6 1849 aa12.67□□□□□ -0.38
VRK3-209ENST00000594948 TRBC2A0A5B9 178 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 HYKKA2RU49 373 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 ANKRD34BA5PLL1 514 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 CENPXA8MT69 81 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 J3KTA2 159 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 TLR4O00206 839 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 ZNF197O14709 1029 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 HOXC11O43248 304 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms