RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 CDKL2Q92772 493 aa16.75■□□□□ 0.27
CIRBP-243ENST00000593128 TSPAN17Q96FV3 270 aa16.75■□□□□ 0.27
CIRBP-243ENST00000593128 CCDC77Q9BR77 488 aa16.75■□□□□ 0.27
CIRBP-243ENST00000593128 TMEM79Q9BSE2 394 aa16.75■□□□□ 0.27
CIRBP-243ENST00000593128 DERL2Q9GZP9 239 aa16.75■□□□□ 0.27
CIRBP-243ENST00000593128 REXO4Q9GZR2 422 aaKnown RBP16.75■□□□□ 0.27
CIRBP-243ENST00000593128 CNOT10Q9H9A5 744 aaKnown RBP16.75■□□□□ 0.27
CIRBP-243ENST00000593128 LIN28AQ9H9Z2 209 aaKnown RBP16.75■□□□□ 0.27
CIRBP-243ENST00000593128 POPDC3Q9HBV1 291 aa16.75■□□□□ 0.27
CIRBP-243ENST00000593128 DNAJC11Q9NVH1 559 aa16.75■□□□□ 0.27
CIRBP-243ENST00000593128 MEMO1Q9Y316 297 aa16.75■□□□□ 0.27
CIRBP-243ENST00000593128 LRIT2A6NDA9 550 aa16.74■□□□□ 0.27
CIRBP-243ENST00000593128 CCNT2O60583 730 aaKnown RBP16.74■□□□□ 0.27
CIRBP-243ENST00000593128 ITGA10O75578 1167 aa16.74■□□□□ 0.27
CIRBP-243ENST00000593128 CERS1P27544 350 aa16.74■□□□□ 0.27
CIRBP-243ENST00000593128 PTGER1P34995 402 aa16.74■□□□□ 0.27
CIRBP-243ENST00000593128 HNRNPFP52597 415 aaKnown RBP16.74■□□□□ 0.27
CIRBP-243ENST00000593128 RAB38P57729 211 aa16.74■□□□□ 0.27
CIRBP-243ENST00000593128 GPR85P60893 370 aa16.74■□□□□ 0.27
CIRBP-243ENST00000593128 BMPR2Q13873 1038 aa16.74■□□□□ 0.27
CIRBP-243ENST00000593128 ZNF630Q2M218 657 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-243ENST00000593128 C16orf47Q6ZP98 133 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-243ENST00000593128 ZNF227Q86WZ6 799 aa16.74■□□□□ 0.27
CIRBP-243ENST00000593128 SIAH3Q8IW03 269 aa16.74■□□□□ 0.27
CIRBP-243ENST00000593128 SULF2Q8IWU5 870 aa16.74■□□□□ 0.27
CIRBP-243ENST00000593128 CTAGE3PQ8IX95 158 aa16.74■□□□□ 0.27
CIRBP-243ENST00000593128 TCAIMQ8N3R3 496 aa16.74■□□□□ 0.27
CIRBP-243ENST00000593128 TMEM52Q8NDY8 209 aa16.74■□□□□ 0.27
CIRBP-243ENST00000593128 NCLNQ969V3 563 aa16.74■□□□□ 0.27
CIRBP-243ENST00000593128 VMP1Q96GC9 406 aa16.74■□□□□ 0.27
CIRBP-243ENST00000593128 CAPS2Q9BXY5 557 aa16.74■□□□□ 0.27
CIRBP-243ENST00000593128 ERVK-11Q9UQG0 969 aa16.74■□□□□ 0.27
CIRBP-243ENST00000593128 MRPS33Q9Y291 106 aaKnown RBP16.74■□□□□ 0.27
CIRBP-243ENST00000593128 ZNF835Q9Y2P0 537 aa16.74■□□□□ 0.27
CIRBP-243ENST00000593128 KLF13Q9Y2Y9 288 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-243ENST00000593128 PRRG2O14669 202 aa16.73■□□□□ 0.27
CIRBP-243ENST00000593128 TAPBPO15533 448 aa16.73■□□□□ 0.27
CIRBP-243ENST00000593128 SH3BGRLO75368 114 aa16.73■□□□□ 0.27
CIRBP-243ENST00000593128 STMN1P16949 149 aa16.73■□□□□ 0.27
CIRBP-243ENST00000593128 OR4D1Q15615 310 aa16.73■□□□□ 0.27
CIRBP-243ENST00000593128 PDK4Q16654 411 aa16.73■□□□□ 0.27
CIRBP-243ENST00000593128 APCDD1LQ8NCL9 501 aa16.73■□□□□ 0.27
CIRBP-243ENST00000593128 OR2L5Q8NG80 312 aa16.73■□□□□ 0.27
CIRBP-243ENST00000593128 ADAMTS18Q8TE60 1221 aa16.73■□□□□ 0.27
CIRBP-243ENST00000593128 ANP32BQ92688 251 aaKnown RBP16.73■□□□□ 0.27
CIRBP-243ENST00000593128 PHF12Q96QT6 1004 aa16.73■□□□□ 0.27
CIRBP-243ENST00000593128 CSF3RQ99062 836 aa16.73■□□□□ 0.27
CIRBP-243ENST00000593128 NPLQ9BXD5 320 aaPredicted RBP16.73■□□□□ 0.27
CIRBP-243ENST00000593128 GPRC5BQ9NZH0 403 aa16.73■□□□□ 0.27
CIRBP-243ENST00000593128 RNF112Q9ULX5 631 aa16.73■□□□□ 0.27
CIRBP-243ENST00000593128 PYCARDQ9ULZ3 195 aa16.73■□□□□ 0.27
CIRBP-243ENST00000593128 KLRC4-KLRK1H3BQV0 150 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 TGFBR3LH3BV60 316 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 PEX1O43933 1283 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 CLEC3AO75596 197 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 STK16O75716 305 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 PDE9AO76083 593 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 TPOP07202 933 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 TNNI3P19429 210 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 HPDP32754 393 aaPredicted RBP16.72■□□□□ 0.27
CIRBP-243ENST00000593128 TRHRP34981 398 aaPredicted RBP16.72■□□□□ 0.27
CIRBP-243ENST00000593128 GMPRP36959 345 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 SSR4P51571 173 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 HSD17B7P56937 341 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 TGM3Q08188 693 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 C2orf54Q08AI8 447 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 DOC2AQ14183 400 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 SLMAPQ14BN4 828 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 CDSNQ15517 529 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 HIST2H2ACQ16777 129 aaPredicted RBP16.72■□□□□ 0.27
CIRBP-243ENST00000593128 HIST2H2AA3Q6FI13 130 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 SULT1C3Q6IMI6 304 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 Q6ZPB1 254 aaPredicted RBP16.72■□□□□ 0.27
CIRBP-243ENST00000593128 RAPH1Q70E73 1250 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 GDF7Q7Z4P5 450 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 CCDC25Q86WR0 208 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 SCUBE1Q8IWY4 988 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 QRFPRQ96P65 431 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 F2RL3Q96RI0 385 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 SERINC2Q96SA4 455 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 RBBP8Q99708 897 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 KCMF1Q9P0J7 381 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 PPT2Q9UMR5 302 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 CLCA3PQ9Y6N3 262 aa16.72■□□□□ 0.27
CIRBP-243ENST00000593128 A0A1B0GTH9 108 aa16.71■□□□□ 0.27
CIRBP-243ENST00000593128 C19orf84I3L1E1 186 aa16.71■□□□□ 0.27
CIRBP-243ENST00000593128 HS6ST1O60243 411 aa16.71■□□□□ 0.27
CIRBP-243ENST00000593128 PRKNO60260 465 aaPredicted RBP16.71■□□□□ 0.27
CIRBP-243ENST00000593128 ZFAND5O76080 213 aa16.71■□□□□ 0.27
CIRBP-243ENST00000593128 CLDN14O95500 239 aa16.71■□□□□ 0.27
CIRBP-243ENST00000593128 PCNAP12004 261 aa16.71■□□□□ 0.27
CIRBP-243ENST00000593128 CD1DP15813 335 aa16.71■□□□□ 0.27
CIRBP-243ENST00000593128 GSTM2P28161 218 aa16.71■□□□□ 0.27
CIRBP-243ENST00000593128 GP5P40197 560 aa16.71■□□□□ 0.27
CIRBP-243ENST00000593128 MSH2P43246 934 aa16.71■□□□□ 0.27
CIRBP-243ENST00000593128 MTTPP55157 894 aa16.71■□□□□ 0.27
CIRBP-243ENST00000593128 LIM2P55344 173 aa16.71■□□□□ 0.27
CIRBP-243ENST00000593128 ATP6V0D1P61421 351 aa16.71■□□□□ 0.27
CIRBP-243ENST00000593128 IRF8Q02556 426 aa16.71■□□□□ 0.27
CIRBP-243ENST00000593128 STX4Q12846 297 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms