RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 CSKP41240 450 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 P2RX3P56373 397 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 GPLD1P80108 840 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 MXD1Q05195 221 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 C19orf57Q0VDD7 668 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 ATP13A5Q4VNC0 1218 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 TRIM48Q8IWZ4 208 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 CACTIN-AS1Q8N1I8 211 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 UBASH3BQ8TF42 649 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 KLHL6Q8WZ60 621 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 TMEM80Q96HE8 168 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 MED30Q96HR3 178 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 GON7Q9BXV9 100 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 RACGAP1Q9H0H5 632 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 MIXL1Q9H2W2 232 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 C11orf16Q9NQ32 467 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 NDUFB11Q9NX14 153 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.21■□□□□ 0.35
SPC24-206ENST00000592540 SEC14L5O43304 696 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 CSF2P04141 144 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 MPC1LP0DKB6 136 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 HOXD11P31277 338 aaPredicted RBP17.21■□□□□ 0.35
SPC24-206ENST00000592540 AP1S2P56377 157 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 HBA1P69905 142 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 RBBP4Q09028 425 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 DOC2AQ14183 400 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 LYPD8Q6UX82 237 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 SLC24A5Q71RS6 500 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 HJURPQ8NCD3 748 aaPredicted RBP17.21■□□□□ 0.35
SPC24-206ENST00000592540 BTN2A2Q8WVV5 523 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 SLC25A46Q96AG3 418 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 METTL2AQ96IZ6 378 aaKnown RBP17.21■□□□□ 0.35
SPC24-206ENST00000592540 TMEM245Q9H330 911 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 RHCGQ9UBD6 479 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 SSR3Q9UNL2 185 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 GPSM3Q9Y4H4 160 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 ENPP4Q9Y6X5 453 aa17.21■□□□□ 0.35
SPC24-206ENST00000592540 FABP12A6NFH5 140 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 NPIPB15A6NHN6 443 aaPredicted RBP17.2■□□□□ 0.34
SPC24-206ENST00000592540 FADS2P1A8MWK0 482 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 E7EQ34 232 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 TLR4O00206 839 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 CDRT1O95170 752 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 FHP07954 510 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 HBQ1P09105 142 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 SP140Q13342 867 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 VEPH1Q14D04 833 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 ZNF385BQ569K4 471 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 MEDAGQ5VYS4 303 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 ADNP2Q6IQ32 1131 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 OR4K1Q8NGD4 311 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 OR52N2Q8NGI0 321 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 SLC35A5Q9BS91 424 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 MND1Q9BWT6 205 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 DNAJC27Q9NZQ0 273 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 MAPRE3Q9UPY8 281 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 DSPPQ9NZW4 1301 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 A0A0G2JMP0 313 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 OR6C70A6NIJ9 312 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 SLC16A5O15375 505 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 TPST2O60704 377 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 TMCC2O75069 709 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 SRCP12931 536 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 HTR2BP41595 481 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 KIR2DL3P43628 341 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 SNRPGP62308 76 aaKnown RBP17.2■□□□□ 0.34
SPC24-206ENST00000592540 HOXC5Q00444 222 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 NCF4Q15080 339 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 CRB2Q5IJ48 1285 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 RTP2Q5QGT7 225 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 PDZK1Q5T2W1 519 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 SIGIRRQ6IA17 410 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 ZNF770Q6IQ21 691 aaPredicted RBP17.2■□□□□ 0.34
SPC24-206ENST00000592540 RFPL4BQ6ZWI9 263 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 GDPD1Q8N9F7 314 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 WFDC5Q8TCV5 224 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 CREB3L4Q8TEY5 395 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 REPS1Q96D71 796 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 ALG14Q96F25 216 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 POLR2J2Q9GZM3 115 aaKnown RBP17.2■□□□□ 0.34
SPC24-206ENST00000592540 C1GALT1Q9NS00 363 aa17.2■□□□□ 0.34
SPC24-206ENST00000592540 EXO1Q9UQ84 846 aaKnown RBP17.2■□□□□ 0.34
SPC24-206ENST00000592540 A0A1W2PQL4 384 aaPredicted RBP17.19■□□□□ 0.34
SPC24-206ENST00000592540 ARRDC5A6NEK1 342 aa17.19■□□□□ 0.34
SPC24-206ENST00000592540 FAM227AF5H4B4 570 aa17.19■□□□□ 0.34
SPC24-206ENST00000592540 CPNE3O75131 537 aaKnown RBP17.19■□□□□ 0.34
SPC24-206ENST00000592540 RHCEP18577 417 aa17.19■□□□□ 0.34
SPC24-206ENST00000592540 HLA-DMAP28067 261 aa17.19■□□□□ 0.34
SPC24-206ENST00000592540 PTPN5P54829 565 aa17.19■□□□□ 0.34
SPC24-206ENST00000592540 CDK6Q00534 326 aa17.19■□□□□ 0.34
SPC24-206ENST00000592540 EEF1A2Q05639 463 aaKnown RBP17.19■□□□□ 0.34
SPC24-206ENST00000592540 FCHO2Q0JRZ9 810 aa17.19■□□□□ 0.34
SPC24-206ENST00000592540 LRRC74AQ0VAA2 488 aa17.19■□□□□ 0.34
SPC24-206ENST00000592540 EFR3AQ14156 821 aa17.19■□□□□ 0.34
SPC24-206ENST00000592540 LEXMQ3ZCV2 418 aa17.19■□□□□ 0.34
SPC24-206ENST00000592540 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.19■□□□□ 0.34
SPC24-206ENST00000592540 SAXO2Q658L1 398 aa17.19■□□□□ 0.34
SPC24-206ENST00000592540 CRTC1Q6UUV9 634 aa17.19■□□□□ 0.34
SPC24-206ENST00000592540 THOC6Q86W42 341 aaKnown RBP17.19■□□□□ 0.34
SPC24-206ENST00000592540 TCTE3Q8IZS6 198 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms