RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 FER1L5A0AVI2 2057 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 IGKV1-8A0A0C4DH67 115 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 IQANK1A0A1B0GTG1 560 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 EXOC1LA0A1B0GW35 172 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 H7BY64 318 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 PRRG2O14669 202 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 FFAR3O14843 346 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 HAT1O14929 419 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 GPR42O15529 346 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 RIPK2O43353 540 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 BANF1O75531 89 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 SEC24DO94855 1032 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-226ENST00000591534 CLDN14O95500 239 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 TSPAN12O95859 305 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 BPNT1O95861 308 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 CELA2AP08217 269 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 INHBAP08476 426 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 HIST1H2AGP0C0S8 130 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-226ENST00000591534 SLC35G6P0C7Q6 338 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 ABOP16442 354 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 HIST1H2ADP20671 130 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 JAK1P23458 1154 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 ECHS1P30084 290 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 HSD17B3P37058 310 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 BCL6P41182 706 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 SKIV2L2P42285 1042 aaKnown RBP8.88□□□□□ -0.99
BRCA1-226ENST00000591534 RGS4P49798 205 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 CLCN7P51798 805 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 MAT1AQ00266 395 aaKnown RBP8.88□□□□□ -0.99
BRCA1-226ENST00000591534 OC90Q02509 493 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-226ENST00000591534 TUBA3CQ13748 450 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 HERC3Q15034 1050 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 OR1C1Q15619 314 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 NSDHLQ15738 373 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 SYT16Q17RD7 645 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 FBXW10Q5XX13 1052 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 ZNF470Q6ECI4 717 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 H3F3CQ6NXT2 135 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 TUBA3EQ6PEY2 450 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 LINC00114Q6XXX2 140 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 KIAA0408Q6ZU52 694 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 UBE2R2Q712K3 238 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-226ENST00000591534 REC114Q7Z4M0 266 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 ANKRD37Q7Z713 158 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 LCA5Q86VQ0 697 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 TDRPQ86YL5 185 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 BEST3Q8N1M1 668 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 GHDCQ8N2G8 530 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 UBASH3BQ8TF42 649 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 CHTF18Q8WVB6 975 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 TMEM125Q96AQ2 219 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 MTFMTQ96DP5 389 aaKnown RBP8.88□□□□□ -0.99
BRCA1-226ENST00000591534 PGM2Q96G03 612 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 HIST1H2AHQ96KK5 128 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 CCDC138Q96M89 665 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 PRAP1Q96NZ9 151 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 OR1F2PQ96R84 312 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 HIST1H2AJQ99878 128 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 FAM167BQ9BTA0 163 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 H2AFJQ9BTM1 129 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 TXLNGYQ9BZA5 131 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 COQ3Q9NZJ6 369 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 GALPQ9UBC7 116 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 ZNF180Q9UJW8 692 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 POLR3KQ9Y2Y1 108 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-226ENST00000591534 TEX264Q9Y6I9 313 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 ANKRD12Q6UB98 2062 aa8.88□□□□□ -0.99
BRCA1-226ENST00000591534 OTOGQ6ZRI0 2925 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 CSMD1Q96PZ7 3565 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 APCP25054 2843 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 NPIPA5E9PKD4 350 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 GFYI3L273 518 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 RGS16O15492 202 aaPredicted RBP8.87□□□□□ -0.99
BRCA1-226ENST00000591534 C8GP07360 202 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 SNRPB2P08579 225 aaKnown RBP8.87□□□□□ -0.99
BRCA1-226ENST00000591534 CD96P40200 585 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 MSH2P43246 934 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 YBX1P67809 324 aaKnown RBP8.87□□□□□ -0.99
BRCA1-226ENST00000591534 SLC29A2Q14542 456 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 C3AR1Q16581 482 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 LRFN4Q6PJG9 635 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 Q6ZPB1 254 aaPredicted RBP8.87□□□□□ -0.99
BRCA1-226ENST00000591534 ASPGQ86U10 573 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 SLC26A11Q86WA9 606 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 C17orf64Q86WR6 236 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 ARHGEF39Q8N4T4 335 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 POGLUT1Q8NBL1 392 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 PPFIBP2Q8ND30 876 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 FBXO36Q8NEA4 188 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 PLPP5Q8NEB5 264 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 SLC13A3Q8WWT9 602 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 ANAPC16Q96DE5 110 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 PLPPR2Q96GM1 343 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 SPOCK3Q9BQ16 436 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 HAUS8Q9BT25 410 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 CDC42EP4Q9H3Q1 356 aaKnown RBP8.87□□□□□ -0.99
BRCA1-226ENST00000591534 ACSS3Q9H6R3 686 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 CNOT10Q9H9A5 744 aaKnown RBP8.87□□□□□ -0.99
BRCA1-226ENST00000591534 KLHL1Q9NR64 748 aa8.87□□□□□ -0.99
BRCA1-226ENST00000591534 PSMC3IPQ9P2W1 217 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms