RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 STMN3Q9NZ72 180 aa16.91■□□□□ 0.3
CIRBP-227ENST00000590188 RIPK2O43353 540 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 GCAP28676 217 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 EEF1DP29692 281 aaKnown RBP16.9■□□□□ 0.3
CIRBP-227ENST00000590188 CASP2P42575 452 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 PIK3CGP48736 1102 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 TNFSF10P50591 281 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 MTTPP55157 894 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 LIM2P55344 173 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 GTF2H2Q13888 395 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 TEX35Q5T0J7 233 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 GRHL2Q6ISB3 625 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 GTF2H2CQ6P1K8 395 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 ZNF793Q6ZN11 406 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 UBE3DQ7Z6J8 389 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 CRLF3Q8IUI8 442 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 LAS2Q8IYD9 372 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 ARMC2Q8NEN0 867 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 OR7G3Q8NG95 312 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 PRR7Q8TB68 274 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 GRHL3Q8TE85 626 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 HAS2Q92819 552 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 UBE2E3Q969T4 207 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 SEC16BQ96JE7 1060 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 SERINC2Q96SA4 455 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 NPAS2Q99743 824 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 SORBS1Q9BX66 1292 aaKnown RBP16.9■□□□□ 0.3
CIRBP-227ENST00000590188 NPLQ9BXD5 320 aaPredicted RBP16.9■□□□□ 0.3
CIRBP-227ENST00000590188 OR51B5Q9H339 312 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 MMP25Q9NPA2 562 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 PRDM7Q9NQW5 492 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 PNO1Q9NRX1 252 aaKnown RBP16.9■□□□□ 0.3
CIRBP-227ENST00000590188 TEKT2Q9UIF3 430 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 ZNF180Q9UJW8 692 aa16.9■□□□□ 0.3
CIRBP-227ENST00000590188 IGKV3D-11A0A0A0MRZ8 115 aa16.89■□□□□ 0.29
CIRBP-227ENST00000590188 TCRBV16S1A1N1A0A5B0 115 aa16.89■□□□□ 0.29
CIRBP-227ENST00000590188 SAGE2PA6NJ88 616 aa16.89■□□□□ 0.29
CIRBP-227ENST00000590188 TGFBR3LH3BV60 316 aa16.89■□□□□ 0.29
CIRBP-227ENST00000590188 KLK8O60259 260 aa16.89■□□□□ 0.29
CIRBP-227ENST00000590188 ABHD2P08910 425 aa16.89■□□□□ 0.29
CIRBP-227ENST00000590188 SNRPAP09012 282 aaKnown RBP16.89■□□□□ 0.29
CIRBP-227ENST00000590188 RBP1P09455 135 aa16.89■□□□□ 0.29
CIRBP-227ENST00000590188 PPP2R1BP30154 601 aa16.89■□□□□ 0.29
CIRBP-227ENST00000590188 HPDP32754 393 aaPredicted RBP16.89■□□□□ 0.29
CIRBP-227ENST00000590188 TGM3Q08188 693 aa16.89■□□□□ 0.29
CIRBP-227ENST00000590188 SLC13A2Q13183 592 aa16.89■□□□□ 0.29
CIRBP-227ENST00000590188 E2F2Q14209 437 aa16.89■□□□□ 0.29
CIRBP-227ENST00000590188 PCBP2Q15366 365 aaKnown RBP eCLIP16.89■□□□□ 0.29
CIRBP-227ENST00000590188 CPSF6Q16630 551 aaKnown RBP eCLIP16.89■□□□□ 0.29
CIRBP-227ENST00000590188 RPS27LQ71UM5 84 aaKnown RBP16.89■□□□□ 0.29
CIRBP-227ENST00000590188 TRMT10CQ7L0Y3 403 aaKnown RBP16.89■□□□□ 0.29
CIRBP-227ENST00000590188 FAM26EQ8N5C1 309 aa16.89■□□□□ 0.29
CIRBP-227ENST00000590188 HUS1BQ8NHY5 278 aa16.89■□□□□ 0.29
CIRBP-227ENST00000590188 ZNF354BQ96LW1 612 aa16.89■□□□□ 0.29
CIRBP-227ENST00000590188 CDK15Q96Q40 435 aa16.89■□□□□ 0.29
CIRBP-227ENST00000590188 MTERF1Q99551 399 aaKnown RBP16.89■□□□□ 0.29
CIRBP-227ENST00000590188 IPPKQ9H8X2 491 aa16.89■□□□□ 0.29
CIRBP-227ENST00000590188 RNF11Q9Y3C5 154 aa16.89■□□□□ 0.29
CIRBP-227ENST00000590188 UBR5O95071 2799 aaPredicted RBP16.88■□□□□ 0.29
CIRBP-227ENST00000590188 TRAV17A0A0B4J275 112 aa16.88■□□□□ 0.29
CIRBP-227ENST00000590188 OR5H15A6NDH6 313 aa16.88■□□□□ 0.29
CIRBP-227ENST00000590188 E2F3O00716 465 aa16.88■□□□□ 0.29
CIRBP-227ENST00000590188 SMIM24O75264 130 aa16.88■□□□□ 0.29
CIRBP-227ENST00000590188 MYO1DO94832 1006 aa16.88■□□□□ 0.29
CIRBP-227ENST00000590188 MYBL2P10244 700 aa16.88■□□□□ 0.29
CIRBP-227ENST00000590188 CNTFP26441 200 aa16.88■□□□□ 0.29
CIRBP-227ENST00000590188 SSR2P43308 183 aa16.88■□□□□ 0.29
CIRBP-227ENST00000590188 RPS13P62277 151 aaKnown RBP16.88■□□□□ 0.29
CIRBP-227ENST00000590188 TSNAXIP1Q2TAA8 658 aa16.88■□□□□ 0.29
CIRBP-227ENST00000590188 ACER2Q5QJU3 275 aa16.88■□□□□ 0.29
CIRBP-227ENST00000590188 FHL5Q5TD97 284 aa16.88■□□□□ 0.29
CIRBP-227ENST00000590188 SCUBE1Q8IWY4 988 aa16.88■□□□□ 0.29
CIRBP-227ENST00000590188 SREK1Q8WXA9 508 aaKnown RBP16.88■□□□□ 0.29
CIRBP-227ENST00000590188 ATP6V1E2Q96A05 226 aa16.88■□□□□ 0.29
CIRBP-227ENST00000590188 NSUN5Q96P11 429 aaKnown RBP16.88■□□□□ 0.29
CIRBP-227ENST00000590188 KCNC2Q96PR1 638 aa16.88■□□□□ 0.29
CIRBP-227ENST00000590188 MAPKAP1Q9BPZ7 522 aa16.88■□□□□ 0.29
CIRBP-227ENST00000590188 CDCP1Q9H5V8 836 aa16.88■□□□□ 0.29
CIRBP-227ENST00000590188 NOL11Q9H8H0 719 aaKnown RBP16.88■□□□□ 0.29
CIRBP-227ENST00000590188 AGPAT4Q9NRZ5 378 aa16.88■□□□□ 0.29
CIRBP-227ENST00000590188 FBXW2Q9UKT8 454 aa16.88■□□□□ 0.29
CIRBP-227ENST00000590188 DAPP1Q9UN19 280 aa16.88■□□□□ 0.29
CIRBP-227ENST00000590188 MMACHCQ9Y4U1 282 aa16.88■□□□□ 0.29
CIRBP-227ENST00000590188 TNPO3Q9Y5L0 923 aaKnown RBP16.88■□□□□ 0.29
CIRBP-227ENST00000590188 CPAMD8Q8IZJ3 1885 aa16.88■□□□□ 0.29
CIRBP-227ENST00000590188 CCDC189A1A4V9 331 aa16.87■□□□□ 0.29
CIRBP-227ENST00000590188 ANKUB1A6NFN9 424 aa16.87■□□□□ 0.29
CIRBP-227ENST00000590188 AGFG2O95081 481 aa16.87■□□□□ 0.29
CIRBP-227ENST00000590188 CBX6O95503 412 aa16.87■□□□□ 0.29
CIRBP-227ENST00000590188 ATP5A1P25705 553 aaKnown RBP16.87■□□□□ 0.29
CIRBP-227ENST00000590188 RAP1GDS1P52306 607 aa16.87■□□□□ 0.29
CIRBP-227ENST00000590188 TAS2R50P59544 299 aa16.87■□□□□ 0.29
CIRBP-227ENST00000590188 ID2Q02363 134 aa16.87■□□□□ 0.29
CIRBP-227ENST00000590188 SLC29A2Q14542 456 aa16.87■□□□□ 0.29
CIRBP-227ENST00000590188 MEP1AQ16819 746 aa16.87■□□□□ 0.29
CIRBP-227ENST00000590188 AP5B1Q2VPB7 878 aa16.87■□□□□ 0.29
CIRBP-227ENST00000590188 KHDRBS2Q5VWX1 349 aaKnown RBP16.87■□□□□ 0.29
CIRBP-227ENST00000590188 LIPJQ5W064 366 aa16.87■□□□□ 0.29
CIRBP-227ENST00000590188 FAM219BQ5XKK7 198 aa16.87■□□□□ 0.29
CIRBP-227ENST00000590188 H3F3CQ6NXT2 135 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms