RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 NAGSQ8N159 534 aa6.86□□□□□ -1.31
SPIDR-228ENST00000588781 STX19Q8N4C7 294 aa6.86□□□□□ -1.31
SPIDR-228ENST00000588781 NFKBIDQ8NI38 313 aa6.86□□□□□ -1.31
SPIDR-228ENST00000588781 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.86□□□□□ -1.31
SPIDR-228ENST00000588781 PROX1Q92786 737 aa6.86□□□□□ -1.31
SPIDR-228ENST00000588781 NEURL3Q96EH8 262 aa6.86□□□□□ -1.31
SPIDR-228ENST00000588781 HSPBAP1Q96EW2 488 aa6.86□□□□□ -1.31
SPIDR-228ENST00000588781 ZBED6CLQ96FA7 236 aaPredicted RBP6.86□□□□□ -1.31
SPIDR-228ENST00000588781 SH3YL1Q96HL8 342 aaPredicted RBP6.86□□□□□ -1.31
SPIDR-228ENST00000588781 FAM210AQ96ND0 272 aa6.86□□□□□ -1.31
SPIDR-228ENST00000588781 CDX2Q99626 313 aaPredicted RBP6.86□□□□□ -1.31
SPIDR-228ENST00000588781 WRAP53Q9BUR4 548 aaKnown RBP6.86□□□□□ -1.31
SPIDR-228ENST00000588781 FAIM2Q9BWQ8 316 aa6.86□□□□□ -1.31
SPIDR-228ENST00000588781 MMP27Q9H306 513 aa6.86□□□□□ -1.31
SPIDR-228ENST00000588781 OCEL1Q9H607 264 aa6.86□□□□□ -1.31
SPIDR-228ENST00000588781 A4GALTQ9NPC4 353 aa6.86□□□□□ -1.31
SPIDR-228ENST00000588781 ACOT13Q9NPJ3 140 aa6.86□□□□□ -1.31
SPIDR-228ENST00000588781 WASH6PQ9NQA3 447 aa6.86□□□□□ -1.31
SPIDR-228ENST00000588781 CNOT2Q9NZN8 540 aaKnown RBP6.86□□□□□ -1.31
SPIDR-228ENST00000588781 UTS2RQ9UKP6 389 aa6.86□□□□□ -1.31
SPIDR-228ENST00000588781 ACSL5Q9ULC5 683 aa6.86□□□□□ -1.31
SPIDR-228ENST00000588781 DUSP12Q9UNI6 340 aa6.86□□□□□ -1.31
SPIDR-228ENST00000588781 MGAT4BQ9UQ53 548 aa6.86□□□□□ -1.31
SPIDR-228ENST00000588781 ASF1AQ9Y294 204 aa6.86□□□□□ -1.31
SPIDR-228ENST00000588781 LYVE1Q9Y5Y7 322 aa6.86□□□□□ -1.31
SPIDR-228ENST00000588781 NCOR1O75376 2440 aa6.86□□□□□ -1.31
SPIDR-228ENST00000588781 MTCL1Q9Y4B5 1905 aaKnown RBP6.86□□□□□ -1.31
SPIDR-228ENST00000588781 PNMA8CA0A1B0GUJ8 204 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 IRGMA1A4Y4 181 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 ISPDA4D126 451 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 OR2A25A4D2G3 310 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 TRIM43BA6NCK2 446 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 TMEM202A6NGA9 273 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 CLCA1A8K7I4 914 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 E9PQ18 207 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 TAF4O00268 1085 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 FAAHO00519 579 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 XPNPEP2O43895 674 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 TLL1O43897 1013 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 LILRB5O75023 590 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 SERPINB7O75635 380 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 PAPLNO95428 1278 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 ETHE1O95571 254 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 FADS2O95864 444 aaKnown RBP6.85□□□□□ -1.31
SPIDR-228ENST00000588781 ADAP00813 363 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 TGFB1P01137 390 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 RPLP0P05388 317 aaKnown RBP6.85□□□□□ -1.31
SPIDR-228ENST00000588781 CDK1P06493 297 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 KLK1P06870 262 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 SLC35G4P0C7Q5 338 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 ACRP10323 421 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 ERGP11308 486 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 ETFAP13804 333 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 DRD2P14416 443 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 CD36P16671 472 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 CEBPBP17676 345 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 DDCP20711 480 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 ACADLP28330 430 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 PDHA2P29803 388 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 CD40LGP29965 261 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 IFNA8P32881 189 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 SOX6P35712 828 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 CTSKP43235 329 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 HMGA2P52926 109 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 MAPK12P53778 367 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 UGT2B15P54855 530 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 MANFP55145 182 aaKnown RBP6.85□□□□□ -1.31
SPIDR-228ENST00000588781 CDH12P55289 794 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 ERVFC1P60507 584 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 HBA1P69905 142 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 REEP5Q00765 189 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 FPGSQ05932 587 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 TGM3Q08188 693 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 PPP1R8Q12972 351 aaKnown RBP6.85□□□□□ -1.31
SPIDR-228ENST00000588781 GAB1Q13480 694 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 GRIN2CQ14957 1233 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 MLC1Q15049 377 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 CTF1Q16619 201 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 LRRC26Q2I0M4 334 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 TMEM35AQ53FP2 167 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 SLC44A4Q53GD3 710 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 TJAP1Q5JTD0 557 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 ZNF648Q5T619 568 aaPredicted RBP6.85□□□□□ -1.31
SPIDR-228ENST00000588781 C9orf64Q5T6V5 341 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 DEPDC1Q5TB30 811 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 KHDRBS2Q5VWX1 349 aaKnown RBP6.85□□□□□ -1.31
SPIDR-228ENST00000588781 MEDAGQ5VYS4 303 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 LAIR2Q6ISS4 152 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 DCDC5Q6ZRR9 648 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 SLC16A12Q6ZSM3 486 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 GRASPQ7Z6J2 395 aaPredicted RBP6.85□□□□□ -1.31
SPIDR-228ENST00000588781 TMCO2Q7Z6W1 182 aaPredicted RBP6.85□□□□□ -1.31
SPIDR-228ENST00000588781 SLC9B2Q86UD5 537 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 NUDT13Q86X67 352 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 LRRC56Q8IYG6 542 aaPredicted RBP6.85□□□□□ -1.31
SPIDR-228ENST00000588781 GJD3Q8N144 294 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 CENPSQ8N2Z9 138 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 C10orf111Q8N326 155 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 SLC15A4Q8N697 577 aa6.85□□□□□ -1.31
SPIDR-228ENST00000588781 SRFBP1Q8NEF9 429 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms