RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 GAL3ST3Q96A11 431 aa16.68■□□□□ 0.26
MKS1-209ENST00000580127 PDLIM2Q96JY6 352 aa16.68■□□□□ 0.26
MKS1-209ENST00000580127 PITHD1Q9GZP4 211 aaPredicted RBP16.68■□□□□ 0.26
MKS1-209ENST00000580127 DEFB127Q9H1M4 99 aa16.68■□□□□ 0.26
MKS1-209ENST00000580127 KLHL31Q9H511 634 aa16.68■□□□□ 0.26
MKS1-209ENST00000580127 KCMF1Q9P0J7 381 aa16.68■□□□□ 0.26
MKS1-209ENST00000580127 KCNN3Q9UGI6 736 aa16.68■□□□□ 0.26
MKS1-209ENST00000580127 EDARQ9UNE0 448 aa16.68■□□□□ 0.26
MKS1-209ENST00000580127 PPIEQ9UNP9 301 aaKnown RBP16.68■□□□□ 0.26
MKS1-209ENST00000580127 RNF6Q9Y252 685 aa16.68■□□□□ 0.26
MKS1-209ENST00000580127 ANKDD1BA6NHY2 528 aa16.67■□□□□ 0.26
MKS1-209ENST00000580127 IFNA16P05015 189 aa16.67■□□□□ 0.26
MKS1-209ENST00000580127 C1GALT1C1LP0DN25 315 aa16.67■□□□□ 0.26
MKS1-209ENST00000580127 GPR85P60893 370 aa16.67■□□□□ 0.26
MKS1-209ENST00000580127 CDKL1Q00532 357 aa16.67■□□□□ 0.26
MKS1-209ENST00000580127 ILF2Q12905 390 aaKnown RBP16.67■□□□□ 0.26
MKS1-209ENST00000580127 EFTUD2Q15029 972 aaKnown RBP eCLIP16.67■□□□□ 0.26
MKS1-209ENST00000580127 TEDDM1Q5T9Z0 273 aa16.67■□□□□ 0.26
MKS1-209ENST00000580127 NDUFAF5Q5TEU4 345 aa16.67■□□□□ 0.26
MKS1-209ENST00000580127 FRA10AC1Q70Z53 315 aa16.67■□□□□ 0.26
MKS1-209ENST00000580127 PSD4Q8NDX1 1056 aa16.67■□□□□ 0.26
MKS1-209ENST00000580127 OR5M3Q8NGP4 307 aa16.67■□□□□ 0.26
MKS1-209ENST00000580127 OR10Q1Q8NGQ4 319 aa16.67■□□□□ 0.26
MKS1-209ENST00000580127 DAZLQ92904 295 aaKnown RBP16.67■□□□□ 0.26
MKS1-209ENST00000580127 VPS39Q96JC1 886 aa16.67■□□□□ 0.26
MKS1-209ENST00000580127 ADAP2Q9NPF8 381 aa16.67■□□□□ 0.26
MKS1-209ENST00000580127 PLSCR2Q9NRY7 297 aa16.67■□□□□ 0.26
MKS1-209ENST00000580127 PPP2R2CQ9Y2T4 447 aa16.67■□□□□ 0.26
MKS1-209ENST00000580127 CELSR1Q9NYQ6 3014 aa16.66■□□□□ 0.26
MKS1-209ENST00000580127 OR14I1A6ND48 311 aa16.66■□□□□ 0.26
MKS1-209ENST00000580127 BCKDKO14874 412 aa16.66■□□□□ 0.26
MKS1-209ENST00000580127 RAB38P57729 211 aa16.66■□□□□ 0.26
MKS1-209ENST00000580127 GXYLT1Q4G148 440 aa16.66■□□□□ 0.26
MKS1-209ENST00000580127 HSDL2Q6YN16 418 aa16.66■□□□□ 0.26
MKS1-209ENST00000580127 GK5Q6ZS86 529 aa16.66■□□□□ 0.26
MKS1-209ENST00000580127 MDGA2Q7Z553 956 aa16.66■□□□□ 0.26
MKS1-209ENST00000580127 LRRC8AQ8IWT6 810 aa16.66■□□□□ 0.26
MKS1-209ENST00000580127 DMRTC2Q8IXT2 367 aaPredicted RBP16.66■□□□□ 0.26
MKS1-209ENST00000580127 OR52N2Q8NGI0 321 aa16.66■□□□□ 0.26
MKS1-209ENST00000580127 OR5L2Q8NGL0 311 aa16.66■□□□□ 0.26
MKS1-209ENST00000580127 ACTRT1Q8TDG2 376 aa16.66■□□□□ 0.26
MKS1-209ENST00000580127 NCLNQ969V3 563 aa16.66■□□□□ 0.26
MKS1-209ENST00000580127 KIAA1191Q96A73 305 aa16.66■□□□□ 0.26
MKS1-209ENST00000580127 SPNS1Q9H2V7 528 aa16.66■□□□□ 0.26
MKS1-209ENST00000580127 NT5DC2Q9H857 520 aa16.66■□□□□ 0.26
MKS1-209ENST00000580127 MYOTQ9UBF9 498 aa16.66■□□□□ 0.26
MKS1-209ENST00000580127 DNAJC13O75165 2243 aa16.66■□□□□ 0.26
MKS1-209ENST00000580127 SPG11Q96JI7 2443 aa16.66■□□□□ 0.26
MKS1-209ENST00000580127 HCFC1P51610 2035 aa16.65■□□□□ 0.26
MKS1-209ENST00000580127 PHF3Q92576 2039 aaKnown RBP16.65■□□□□ 0.26
MKS1-209ENST00000580127 ZNF407Q9C0G0 2248 aa16.65■□□□□ 0.26
MKS1-209ENST00000580127 FIGNL2A6NMB9 653 aa16.65■□□□□ 0.26
MKS1-209ENST00000580127 FAM90A27PA6NNH2 459 aa16.65■□□□□ 0.26
MKS1-209ENST00000580127 FAM47E-STBD1D6RA91 191 aa16.65■□□□□ 0.26
MKS1-209ENST00000580127 DNALI1O14645 258 aaPredicted RBP16.65■□□□□ 0.26
MKS1-209ENST00000580127 ERI3O43414 337 aaKnown RBP16.65■□□□□ 0.26
MKS1-209ENST00000580127 OR2J2O76002 312 aa16.65■□□□□ 0.26
MKS1-209ENST00000580127 TOXO94900 526 aa16.65■□□□□ 0.26
MKS1-209ENST00000580127 HOXD4P09016 255 aaPredicted RBP16.65■□□□□ 0.26
MKS1-209ENST00000580127 TNNI3P19429 210 aa16.65■□□□□ 0.26
MKS1-209ENST00000580127 CNR1P21554 472 aa16.65■□□□□ 0.26
MKS1-209ENST00000580127 CCZ1BP86790 482 aa16.65■□□□□ 0.26
MKS1-209ENST00000580127 CCZ1P86791 482 aaPredicted RBP16.65■□□□□ 0.26
MKS1-209ENST00000580127 STX4Q12846 297 aa16.65■□□□□ 0.26
MKS1-209ENST00000580127 MYBPHQ13203 477 aa16.65■□□□□ 0.26
MKS1-209ENST00000580127 ELAVL1Q15717 326 aaKnown RBP16.65■□□□□ 0.26
MKS1-209ENST00000580127 TRIM40Q6P9F5 258 aa16.65■□□□□ 0.26
MKS1-209ENST00000580127 SBSNQ6UWP8 590 aa16.65■□□□□ 0.26
MKS1-209ENST00000580127 IL20RBQ6UXL0 311 aa16.65■□□□□ 0.26
MKS1-209ENST00000580127 TMEM200AQ86VY9 491 aa16.65■□□□□ 0.26
MKS1-209ENST00000580127 SCUBE1Q8IWY4 988 aa16.65■□□□□ 0.26
MKS1-209ENST00000580127 KLHDC8AQ8IYD2 350 aa16.65■□□□□ 0.26
MKS1-209ENST00000580127 MORN4Q8NDC4 146 aa16.65■□□□□ 0.26
MKS1-209ENST00000580127 LRRC39Q96DD0 335 aa16.65■□□□□ 0.26
MKS1-209ENST00000580127 SGCZQ96LD1 299 aa16.65■□□□□ 0.26
MKS1-209ENST00000580127 FAM173AQ9BQD7 235 aa16.65■□□□□ 0.26
MKS1-209ENST00000580127 CNOT10Q9H9A5 744 aaKnown RBP16.65■□□□□ 0.26
MKS1-209ENST00000580127 COPS7BQ9H9Q2 264 aaPredicted RBP16.65■□□□□ 0.26
MKS1-209ENST00000580127 PRM3Q9NNZ6 103 aa16.65■□□□□ 0.26
MKS1-209ENST00000580127 CTNNAL1Q9UBT7 734 aa16.65■□□□□ 0.26
MKS1-209ENST00000580127 NKX2-6A6NCS4 301 aa16.64■□□□□ 0.25
MKS1-209ENST00000580127 LRIT2A6NDA9 550 aa16.64■□□□□ 0.25
MKS1-209ENST00000580127 NPIPA2E9PIF3 369 aa16.64■□□□□ 0.25
MKS1-209ENST00000580127 NPIPA3F8WFD2 350 aa16.64■□□□□ 0.25
MKS1-209ENST00000580127 CTNSO60931 367 aa16.64■□□□□ 0.25
MKS1-209ENST00000580127 CLEC3AO75596 197 aa16.64■□□□□ 0.25
MKS1-209ENST00000580127 WDR47O94967 919 aa16.64■□□□□ 0.25
MKS1-209ENST00000580127 ZWINTO95229 277 aa16.64■□□□□ 0.25
MKS1-209ENST00000580127 IGFBP2P18065 325 aa16.64■□□□□ 0.25
MKS1-209ENST00000580127 ACVR2AP27037 513 aa16.64■□□□□ 0.25
MKS1-209ENST00000580127 MSX1P28360 303 aa16.64■□□□□ 0.25
MKS1-209ENST00000580127 GPR143P51810 404 aa16.64■□□□□ 0.25
MKS1-209ENST00000580127 SLC12A2P55011 1212 aa16.64■□□□□ 0.25
MKS1-209ENST00000580127 RUNX2Q13950 521 aa16.64■□□□□ 0.25
MKS1-209ENST00000580127 RTL4Q6ZR62 310 aa16.64■□□□□ 0.25
MKS1-209ENST00000580127 ADAMTSL2Q86TH1 951 aa16.64■□□□□ 0.25
MKS1-209ENST00000580127 SRFBP1Q8NEF9 429 aaKnown RBP16.64■□□□□ 0.25
MKS1-209ENST00000580127 OR2L5Q8NG80 312 aa16.64■□□□□ 0.25
MKS1-209ENST00000580127 OR2M7Q8NG81 312 aa16.64■□□□□ 0.25
MKS1-209ENST00000580127 MS4A6EQ96DS6 147 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms