RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 WDFY3Q8IZQ1 3526 aa16.16■□□□□ 0.18
NUP88-210ENST00000574867 IGLV3-12A0A075B6K2 115 aa16.16■□□□□ 0.18
NUP88-210ENST00000574867 A0A0A6YYD5 115 aa16.16■□□□□ 0.18
NUP88-210ENST00000574867 ARHGAP10A1A4S6 786 aa16.16■□□□□ 0.18
NUP88-210ENST00000574867 LSM1O15116 133 aaKnown RBP16.16■□□□□ 0.18
NUP88-210ENST00000574867 VPS4BO75351 444 aa16.16■□□□□ 0.18
NUP88-210ENST00000574867 RAB40ALP0C0E4 278 aa16.16■□□□□ 0.18
NUP88-210ENST00000574867 IL10P22301 178 aa16.16■□□□□ 0.18
NUP88-210ENST00000574867 SLC9A5Q14940 896 aa16.16■□□□□ 0.18
NUP88-210ENST00000574867 NCF4Q15080 339 aa16.16■□□□□ 0.18
NUP88-210ENST00000574867 ATP6AP1LQ52LC2 224 aa16.16■□□□□ 0.18
NUP88-210ENST00000574867 GALNT18Q6P9A2 607 aa16.16■□□□□ 0.18
NUP88-210ENST00000574867 FAM199XQ6PEV8 388 aaPredicted RBP16.16■□□□□ 0.18
NUP88-210ENST00000574867 CYP20A1Q6UW02 462 aa16.16■□□□□ 0.18
NUP88-210ENST00000574867 LRRC34Q8IZ02 419 aa16.16■□□□□ 0.18
NUP88-210ENST00000574867 CT55Q8WUE5 264 aa16.16■□□□□ 0.18
NUP88-210ENST00000574867 C11orf24Q96F05 449 aaPredicted RBP16.16■□□□□ 0.18
NUP88-210ENST00000574867 APIPQ96GX9 242 aa16.16■□□□□ 0.18
NUP88-210ENST00000574867 OR1F2PQ96R84 312 aa16.16■□□□□ 0.18
NUP88-210ENST00000574867 SORBS1Q9BX66 1292 aaKnown RBP16.16■□□□□ 0.18
NUP88-210ENST00000574867 MCM8Q9UJA3 840 aa16.16■□□□□ 0.18
NUP88-210ENST00000574867 TMED5Q9Y3A6 229 aa16.16■□□□□ 0.18
NUP88-210ENST00000574867 AKAP13Q12802 2813 aa16.16■□□□□ 0.18
NUP88-210ENST00000574867 EEDO75530 441 aaKnown RBP16.15■□□□□ 0.18
NUP88-210ENST00000574867 RNH1P13489 461 aaKnown RBP16.15■□□□□ 0.18
NUP88-210ENST00000574867 MAT1AQ00266 395 aaKnown RBP16.15■□□□□ 0.18
NUP88-210ENST00000574867 OCA2Q04671 838 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 LCN10Q6JVE6 187 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 MRPL14Q6P1L8 145 aaKnown RBP16.15■□□□□ 0.18
NUP88-210ENST00000574867 CA13Q8N1Q1 262 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 OR5T3Q8NGG3 340 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 OR51Q1Q8NH59 317 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 KIAA1143Q96AT1 154 aaPredicted RBP16.15■□□□□ 0.18
NUP88-210ENST00000574867 TUBGCP3Q96CW5 907 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 C3orf30Q96M34 536 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 TGIF2Q9GZN2 237 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 AKIRIN1Q9H9L7 192 aaPredicted RBP16.15■□□□□ 0.18
NUP88-210ENST00000574867 MS4A12Q9NXJ0 267 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 PHF11Q9UIL8 331 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 CROTQ9UKG9 612 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 DAPP1Q9UN19 280 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 PADI2Q9Y2J8 665 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 USH1CQ9Y6N9 552 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 SPACA6W5XKT8 324 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 CHST10O43529 356 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 SEC22BO75396 215 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 MYO1DO94832 1006 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 TGDSO95455 350 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 TCN2P20062 427 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 TPP2P29144 1249 aaPredicted RBP16.15■□□□□ 0.18
NUP88-210ENST00000574867 TIA1P31483 386 aaKnown RBP eCLIP16.15■□□□□ 0.18
NUP88-210ENST00000574867 RAB38P57729 211 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 OLR1P78380 273 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 CCNYL2Q5T2Q4 361 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 UNQ6494/PRO21346Q6UXR6 183 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 KCNE4Q8WWG9 221 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 SIKE1Q9BRV8 207 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 EFHD1Q9BUP0 239 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 GPR87Q9BY21 358 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 CTSFQ9UBX1 484 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 KCND3Q9UK17 655 aa16.15■□□□□ 0.18
NUP88-210ENST00000574867 ATP6AP2A0A1C7CYW4 349 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 PSMD12O00232 456 aaPredicted RBP16.14■□□□□ 0.17
NUP88-210ENST00000574867 TLX3O43711 291 aaPredicted RBP16.14■□□□□ 0.17
NUP88-210ENST00000574867 PCDH7O60245 1069 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 ATP6AP2O75787 350 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 KLK1P06870 262 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 ALOX15P16050 662 aaPredicted RBP16.14■□□□□ 0.17
NUP88-210ENST00000574867 DLSTP36957 453 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 XCR1P46094 333 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 GSTM5P46439 218 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 LIM2P55344 173 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 RPS15P62841 145 aaKnown RBP16.14■□□□□ 0.17
NUP88-210ENST00000574867 FOXK2Q01167 660 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 SLAMF1Q13291 335 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 DNASE1L3Q13609 305 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 RUNX2Q13950 521 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 SYT16Q17RD7 645 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 SMU1Q2TAY7 513 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 MLIPQ5VWP3 458 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 MRM1Q6IN84 353 aaKnown RBP16.14■□□□□ 0.17
NUP88-210ENST00000574867 YIPF2Q9BWQ6 316 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 DPH1Q9BZG8 443 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 PCDHGA6Q9Y5G7 932 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 NUP210LQ5VU65 1888 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 TERTO14746 1132 aaKnown RBP16.14■□□□□ 0.17
NUP88-210ENST00000574867 GUCY1B2O75343 617 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 VIMP08670 466 aaKnown RBP16.14■□□□□ 0.17
NUP88-210ENST00000574867 FAM58BPP0C7Q3 252 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 ACPPP15309 386 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 JAK1P23458 1154 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 MAPK1P28482 360 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 MAPK12P53778 367 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 TRA2BP62995 288 aaKnown RBP16.14■□□□□ 0.17
NUP88-210ENST00000574867 RPL38P63173 70 aaKnown RBP16.14■□□□□ 0.17
NUP88-210ENST00000574867 MAD2L1Q13257 205 aaPredicted RBP16.14■□□□□ 0.17
NUP88-210ENST00000574867 CLN3Q13286 438 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 KIAA0040Q15053 153 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 NKG7Q16617 165 aa16.14■□□□□ 0.17
NUP88-210ENST00000574867 GALNTL6Q49A17 601 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms