RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 CXCR3P49682 368 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 PSMD7P51665 324 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 SLC7A2P52569 658 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 NDST1P52848 882 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 P2RX3P56373 397 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 SOX10P56693 466 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 PRPS1P60891 318 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 SNRPEP62304 92 aaKnown RBP4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 DSC1Q08554 894 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 PJVKQ0ZLH3 352 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 CDH17Q12864 832 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 ART3Q13508 389 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 HEPACAMQ14CZ8 416 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 P2RY14Q15391 338 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 VAMP3Q15836 100 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 HSPB2Q16082 182 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 STX1AQ16623 288 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 LSM12Q3MHD2 195 aaKnown RBP4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 DNAL1Q4LDG9 190 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 C6orf226Q5I0X4 101 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 PLEKHA7Q6IQ23 1121 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 TMIGD1Q6UXZ0 262 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 WASH2PQ6VEQ5 465 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 PQLC2Q6ZP29 291 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 MEPCEQ7L2J0 689 aaKnown RBP4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 MDGA2Q7Z553 956 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 AKAP14Q86UN6 197 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 AMIGO1Q86WK6 493 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 C16orf71Q8IYS4 520 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 LCORLQ8N3X6 602 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 BHLHE22Q8NFJ8 381 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 CCDC26Q8TAB7 109 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 RHEBL1Q8TAI7 183 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 TBC1D16Q8TBP0 767 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 SCARB1Q8WTV0 552 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 PIGCQ92535 297 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 ELMO1Q92556 727 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 AKAP1Q92667 903 aaKnown RBP eCLIP4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 SEMA4DQ92854 862 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 CCDC124Q96CT7 223 aaKnown RBP4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 COQ8BQ96D53 544 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 PTCD3Q96EY7 689 aaKnown RBP4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 CERS2Q96G23 380 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 PLEKHA8Q96JA3 519 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 PGBD1Q96JS3 809 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 MARK4Q96L34 752 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 FAM20AQ96MK3 541 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 GPR78Q96P69 363 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 OR6C1Q96RD1 312 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 TUBGCP2Q9BSJ2 902 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 CCM2Q9BSQ5 444 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 CHID1Q9BWS9 393 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 UPF3BQ9BZI7 483 aaKnown RBP4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 TMEM39BQ9GZU3 492 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 ADAMTS10Q9H324 1103 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 GOLPH3Q9H4A6 298 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 SAV1Q9H4B6 383 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 ELOVL6Q9H5J4 265 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 METTL8Q9H825 291 aaKnown RBP4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 ELOVL3Q9HB03 270 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 SPHK1Q9NYA1 384 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 MIS18AQ9NYP9 233 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 PIPOXQ9P0Z9 390 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 TXNDC16Q9P2K2 825 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 OR14J1Q9UGF5 321 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 VANGL2Q9ULK5 521 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 GRIP1Q9Y3R0 1128 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 NPTNQ9Y639 398 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 U3KQE9 123 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 NEURL4Q96JN8 1562 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 SERPINE3A8MV23 424 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 HEPACAM2A8MVW5 462 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 C9orf172C9J069 976 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 E7ENQ6 273 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 AP4M1O00189 453 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 CLDN5O00501 218 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 VCYO14598 125 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 STX7O15400 261 aaKnown RBP4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 GPAA1O43292 621 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 XRCC3O43542 346 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 SCN2BO60939 215 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 CYP7B1O75881 506 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 OR2F2O95006 317 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 BAG3O95817 575 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 NUDT17P0C025 328 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 PCMT1P22061 227 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 MPZP25189 248 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 PSMA2P25787 234 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 GNA11P29992 359 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 GKP32189 559 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 MAPK12P53778 367 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 RAD23BP54727 409 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 RAB14P61106 215 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 PSMC5P62195 406 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 CYP4F2P78329 520 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 SLC18A2Q05940 514 aa4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 ZFP36L1Q07352 338 aaKnown RBP4.72□□□□□ -1.65
TOPBP1-210ENST00000572787 NME3Q13232 169 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms