RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 MRPL28Q13084 256 aaKnown RBP16.12■□□□□ 0.17
LITAF-209ENST00000571688 MADCAM1Q13477 382 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 ANGPT1Q15389 498 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 TMEM201Q5SNT2 666 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 GPRC6AQ5T6X5 926 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 ABI3BPQ7Z7G0 1075 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 NAGSQ8N159 534 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 C2orf69Q8N8R5 385 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 EID2BQ96D98 161 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 MAGEB10Q96LZ2 347 aaPredicted RBP16.12■□□□□ 0.17
LITAF-209ENST00000571688 PPP1R3EQ9H7J1 279 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 PCDHGB7Q9Y5F8 929 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 PIKFYVEQ9Y2I7 2098 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 FAM240BA0A1B0GVZ2 78 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 SERTM1A2A2V5 107 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 UPK3BL1B0FP48 263 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 UPK3BL2E5RIL1 263 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 LYRM1O43325 122 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 RFPL3O75679 317 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 MGAT3Q09327 533 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 GAB1Q13480 694 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 Q8N402 240 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 CLDN19Q8N6F1 224 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 L3MBTL4Q8NA19 623 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 AQP11Q8NBQ7 271 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 IL4I1Q96RQ9 567 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 AIFM2Q9BRQ8 373 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 MED18Q9BUE0 208 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 CRISPLD1Q9H336 500 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 FBXO44Q9H4M3 255 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 GALNT9Q9HCQ5 603 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 ABI2Q9NYB9 513 aaPredicted RBP16.12■□□□□ 0.17
LITAF-209ENST00000571688 FLRT1Q9NZU1 646 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 MARCH2Q9P0N8 246 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 SNX11Q9Y5W9 270 aa16.12■□□□□ 0.17
LITAF-209ENST00000571688 ORC5O43913 435 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 TNFRSF21O75509 655 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 DDX5P17844 614 aaKnown RBP16.11■□□□□ 0.17
LITAF-209ENST00000571688 TNNI3P19429 210 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 XCR1P46094 333 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 C21orf58P58505 322 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 C22orf42Q6IC83 251 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 KCTD20Q7Z5Y7 419 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 RBFAQ8N0V3 343 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 PIH1D2Q8WWB5 315 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 AKAP1Q92667 903 aaKnown RBP eCLIP16.11■□□□□ 0.172e-6■■■□□ 16.5
LITAF-209ENST00000571688 NELL2Q99435 816 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 SPON2Q9BUD6 331 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 PDGFDQ9GZP0 370 aaPredicted RBP16.11■□□□□ 0.17
LITAF-209ENST00000571688 DSPPQ9NZW4 1301 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 TDRD15B5MCY1 1934 aaKnown RBP16.11■□□□□ 0.17
LITAF-209ENST00000571688 SCN8AQ9UQD0 1980 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 ARRDC5A6NEK1 342 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 TLR4O00206 839 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 GASTP01350 101 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 RGS1Q08116 209 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 MFSD13AQ14CX5 517 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 PAQR6Q6TCH4 344 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 TEX261Q6UWH6 196 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 LRRC70Q7Z2Q7 622 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.11■□□□□ 0.17
LITAF-209ENST00000571688 TMEM145Q8NBT3 493 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 TOR1AIP2Q8NFQ8 470 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 SLC6A18Q96N87 628 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 PIP5K1AQ99755 562 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 DUSP26Q9BV47 211 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 LATS2Q9NRM7 1088 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 BTNL2Q9UIR0 455 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 U3KQ87 197 aa16.11■□□□□ 0.17
LITAF-209ENST00000571688 KDELR3O43731 214 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 TSC22D2O75157 780 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 TSPAN9O75954 239 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 PRAMEF12O95522 483 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 SDC2P34741 201 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 PPP3R1P63098 170 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 ZXDCQ2QGD7 858 aaPredicted RBP16.1■□□□□ 0.17
LITAF-209ENST00000571688 SPRYD7Q5W111 196 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 SDR16C5Q8N3Y7 309 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 RNF175Q8N4F7 328 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 AP3S1Q92572 193 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 KATNB1Q9BVA0 655 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 B3GAT2Q9NPZ5 323 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 C11orf16Q9NQ32 467 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 DNAJC27Q9NZQ0 273 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 NDOR1Q9UHB4 597 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 GAPDHSO14556 408 aaPredicted RBP16.1■□□□□ 0.17
LITAF-209ENST00000571688 BET1O15155 118 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 PLOD3O60568 738 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 POMCP01189 267 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 ETV3P41162 512 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 PSEN2P49810 448 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 ZNF91Q05481 1191 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 C1DQ13901 141 aaKnown RBP16.1■□□□□ 0.17
LITAF-209ENST00000571688 ELOAQ14241 798 aaKnown RBP16.1■□□□□ 0.17
LITAF-209ENST00000571688 FRG2Q64ET8 278 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 ANKRD54Q6NXT1 300 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 TMEM65Q6PI78 240 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 FAM151BQ6UXP7 276 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 ZNF730Q6ZMV8 503 aa16.1■□□□□ 0.17
LITAF-209ENST00000571688 SLC37A3Q8NCC5 494 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms