RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 ZBTB11O95625 1053 aaPredicted RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 CD3GP09693 182 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 IL1R2P27930 398 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 GCGRP47871 477 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 CLCN7P51798 805 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 CDH6P55285 790 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 NAA20P61599 178 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 PRKD1Q15139 912 aaPredicted RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 NTRK2Q16620 822 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 HNRNPA1L2Q32P51 320 aaKnown RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 FAM98BQ52LJ0 330 aaKnown RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 DENND2CQ68D51 928 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 UNC5AQ6ZN44 842 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 PARGQ86W56 976 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 NAXDQ8IW45 347 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 EMC1Q8N766 993 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 STT3BQ8TCJ2 826 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 APIPQ96GX9 242 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 TOR3AQ9H497 397 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 DPEP3Q9H4B8 488 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 THUMPD1Q9NXG2 353 aaKnown RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 UVRAGQ9P2Y5 699 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 THAP10Q9P2Z0 257 aaPredicted RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 TBC1D30Q9Y2I9 924 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 COPG1Q9Y678 874 aaKnown RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 CSNK1G3Q9Y6M4 447 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 FBLL1A6NHQ2 334 aaKnown RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 H3BMM5 538 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 PSMD12O00232 456 aaPredicted RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 SYT5O00445 386 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 FBP2O00757 339 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 HGSO14964 777 aaPredicted RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 ZNF208O43345 1280 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 RHBDL1O75783 438 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 GSRP00390 522 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 F11P03951 625 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 ITGA2BP08514 1039 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 ANXA5P08758 320 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 CSKP41240 450 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 RPL21P46778 160 aaKnown RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 HK2P52789 917 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 MLF1P58340 268 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 ATP11AP98196 1134 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 DUPD1Q68J44 220 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 LRRC8EQ6NSJ5 796 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 UGT3A1Q6NUS8 523 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 SHISA2Q6UWI4 295 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 ALKAL1Q6UXT8 129 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 RASGRP3Q8IV61 690 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 DEFB106AQ8N104 65 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 RNF152Q8N8N0 203 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 POMGNT2Q8NAT1 580 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 ANGPTL6Q8NI99 470 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 FBXL20Q96IG2 436 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 ZNF641Q96N77 438 aaPredicted RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 OPALINQ96PE5 141 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 MRPL45Q9BRJ2 306 aaKnown RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 RAB11FIP5Q9BXF6 653 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 ARMC1Q9NVT9 282 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 CORINQ9Y5Q5 1042 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 A0A0J9YVX5 310 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 KCNU1A8MYU2 1149 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 E9PI62 339 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 ARHGEF9O43307 516 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 CILPO75339 1184 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 ADAP1O75689 374 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 GPX5O75715 221 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 CD48P09326 243 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 SLC35G4P0C7Q5 338 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 ZNF30P17039 623 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 HMGCLP35914 325 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 CAPGP40121 348 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 NUP107P57740 925 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 RAB1AP62820 205 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 OCA2Q04671 838 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 SLC3A1Q07837 685 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 MTM1Q13496 603 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 ALKBH1Q13686 389 aaKnown RBP6.38□□□□□ -1.39
SMG1-217ENST00000569764 ZBTB6Q15916 424 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 GAB4Q2WGN9 574 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 PHYHD1Q5SRE7 291 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 C6orf10Q5SRN2 563 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 PMS2CLQ68D20 193 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 UNQ6494/PRO21346Q6UXR6 183 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 GPR141Q7Z602 305 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 PHF13Q86YI8 300 aaPredicted RBP6.38□□□□□ -1.39
SMG1-217ENST00000569764 RNASE8Q8TDE3 154 aaKnown RBP6.38□□□□□ -1.39
SMG1-217ENST00000569764 RHBDF1Q96CC6 855 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 DAZAP1Q96EP5 407 aaKnown RBP6.38□□□□□ -1.39
SMG1-217ENST00000569764 EXO5Q9H790 373 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 WDR41Q9HAD4 459 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 C19orf25Q9UFG5 118 aaPredicted RBP6.38□□□□□ -1.39
SMG1-217ENST00000569764 TINAGQ9UJW2 476 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 SERTAD3Q9UJW9 196 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 F5P12259 2224 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 TMEM191CA6NGB0 347 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 TLR4O00206 839 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 EFSO43281 561 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 SHBGP04278 402 aa6.38□□□□□ -1.39
SMG1-217ENST00000569764 PROS1P07225 676 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms