RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 SEC61BP60468 96 aaKnown RBP3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 RPP38P78345 283 aaKnown RBP3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 HSF1Q00613 529 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 PDE1BQ01064 536 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 SPAG1Q07617 926 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 HSPA14Q0VDF9 509 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 PJVKQ0ZLH3 352 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 BST1Q10588 318 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 MSLNQ13421 630 aaPredicted RBP3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 TUBA3CQ13748 450 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 SELPLGQ14242 412 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 HEPACAMQ14CZ8 416 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 POM121L1PQ3SYA9 428 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 PIK3CD-AS1Q5SR53 167 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 LY6G5CQ5SRR4 150 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 NDUFAF5Q5TEU4 345 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 LIPJQ5W064 366 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 OR4A47Q6IF82 309 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 LRRC8BQ6P9F7 803 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 TUBA3EQ6PEY2 450 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 CBLN3Q6UW01 205 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 SLC16A12Q6ZSM3 486 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 ANKRD33Q7Z3H0 272 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 TRMT11Q7Z4G4 463 aaKnown RBP3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 GRASPQ7Z6J2 395 aaPredicted RBP3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 PTOV1Q86YD1 416 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 TMEM139Q8IV31 216 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 ZNF34Q8IZ26 560 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 LRTM2Q8N967 370 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 MNS1Q8NEH6 495 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 ZNF548Q8NEK5 533 aaPredicted RBP3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 BPIFCQ8NFQ6 507 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 FGFBP3Q8TAT2 258 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 TRMT10AQ8TBZ6 339 aaKnown RBP3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 CHPT1Q8WUD6 406 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 IRGQQ8WZA9 623 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 HAS1Q92839 578 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 NCLNQ969V3 563 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 KIAA1143Q96AT1 154 aaPredicted RBP3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 TMEM45BQ96B21 275 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 COQ8BQ96D53 544 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 SLC41A3Q96GZ6 507 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 TXNDC15Q96J42 360 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 MTG1Q9BT17 334 aaPredicted RBP3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 PANK2Q9BZ23 570 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 SPRY4Q9C004 299 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 VN1R1Q9GZP7 353 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 ZMYND12Q9H0C1 365 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 XKR8Q9H6D3 395 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 HAUS4Q9H6D7 363 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 ZDHHC6Q9H6R6 413 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 EXO5Q9H790 373 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 VCPKMTQ9H867 229 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 MARCH7Q9H992 704 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 FN3KRPQ9HA64 309 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 MEAF6Q9HAF1 191 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 RAB18Q9NP72 206 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 AURKAIP1Q9NWT8 199 aaPredicted RBP3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 C1RLQ9NZP8 487 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 ONECUT1Q9UBC0 465 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 SEC14L3Q9UDX4 400 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 SLC12A6Q9UHW9 1150 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 CRLS1Q9UJA2 301 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 GRID1Q9ULK0 1009 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 FZD10Q9ULW2 581 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 ERVK-19Q9WJR5 959 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 NIP7Q9Y221 180 aaKnown RBP eCLIP3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 IFT52Q9Y366 437 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 ETV7Q9Y603 341 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 ZNF804BA4D1E1 1349 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 PHLPP2Q6ZVD8 1323 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 NPC1L1Q9UHC9 1359 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 PRAG1Q86YV5 1406 aa3.08□□□□□ -1.92
HERPUD1-211ENST00000566550 TRBV5-3A0A0A0MS03 114 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 A0A1W2PRB8 838 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 BTBD17A6NE02 478 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 ANTXRLA6NF34 631 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 OR2AG2A6NM03 316 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 NPIPA2E9PIF3 369 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 ABCD4O14678 606 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 KLF11O14901 512 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 LSM1O15116 133 aaKnown RBP3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 NVLO15381 856 aaKnown RBP3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 B4GAT1O43505 415 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 RNF13O43567 381 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 SYT7O43581 403 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 KRT86O43790 486 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 ECE2O60344 883 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 DFNA5O60443 496 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 BCAS1O75363 584 aaPredicted RBP3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 NEBLO76041 1014 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 WISP2O76076 250 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 SLITRK3O94933 977 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 AGTP01019 485 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 LDLRP01130 860 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 RAF1P04049 648 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 ANXA4P09525 319 aaPredicted RBP3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 RHOXF2BP0C7M4 288 aa3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 CYP19A1P11511 503 aaPredicted RBP3.07□□□□□ -1.92
HERPUD1-211ENST00000566550 ODC1P11926 461 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms