RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 OR6C3Q9NZP0 311 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 HACD3Q9P035 362 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 ZNF148Q9UQR1 794 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 IKBKGQ9Y6K9 419 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 MYH9P35579 1960 aaKnown RBP4.02□□□□□ -1.77
LINC00561-201ENST00000565815 hCG_1818297A0A087WSY0 165 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 A0A087WV48 116 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 ZNF487B1APH4 448 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 SPECC1L-ADORA2AF8WAN1 911 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 H3BNX3 289 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 CHMP2AO43633 222 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 ITM2AO43736 263 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 ZIC3O60481 467 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 NDUFS7O75251 213 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 CCNE2O96020 404 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 MT-ND3P03897 115 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 TMEM191BP0C7N4 346 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 GDI1P31150 447 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 SSR1P43307 286 aaKnown RBP4.02□□□□□ -1.77
LINC00561-201ENST00000565815 SERPINB9P50453 376 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 FCHO2Q0JRZ9 810 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 NAB1Q13506 487 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 SNX1Q13596 522 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 CUL2Q13617 745 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 CUL3Q13618 768 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 ITGA9Q13797 1035 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 TMEM154Q6P9G4 183 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 GLDNQ6ZMI3 551 aaPredicted RBP4.02□□□□□ -1.77
LINC00561-201ENST00000565815 PQLC2Q6ZP29 291 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 CYS1Q717R9 158 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 DPPA4Q7L190 304 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 TMEM173Q86WV6 379 aaPredicted RBP4.02□□□□□ -1.77
LINC00561-201ENST00000565815 TMC8Q8IU68 726 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 PRR26Q8N8Z3 221 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 TMEM35BQ8NCS4 154 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 BEST2Q8NFU1 509 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 DUSP19Q8WTR2 217 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 OIT3Q8WWZ8 545 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 SEMA4DQ92854 862 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 C9orf72Q96LT7 481 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 GBP5Q96PP8 586 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 GFM1Q96RP9 751 aaKnown RBP4.02□□□□□ -1.77
LINC00561-201ENST00000565815 FNBP1Q96RU3 617 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 TSPAN18Q96SJ8 248 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 TREX2Q9BQ50 279 aaPredicted RBP4.02□□□□□ -1.77
LINC00561-201ENST00000565815 TRIM4Q9C037 500 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 KLHL4Q9C0H6 718 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 NMRK1Q9NWW6 199 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 BCAP29Q9UHQ4 241 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 COMMD3-BMI1R4GMX3 469 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 TRANK1O15050 2925 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 PCSK5Q92824 1860 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 SMIM31A0A1B0GVY4 71 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 A8MUI8 341 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 SOCS6O14544 535 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 CTDSP2O14595 271 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 CCL16O15467 120 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 KLHL2O95198 593 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 PENKP01210 267 aaPredicted RBP4.01□□□□□ -1.77
LINC00561-201ENST00000565815 IFNA2P01563 188 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 DNTTP04053 509 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 PCNAP12004 261 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 ENO3P13929 434 aaPredicted RBP4.01□□□□□ -1.77
LINC00561-201ENST00000565815 SELLP14151 372 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 ALOX12P18054 663 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 CRABP2P29373 138 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 PRDX6P30041 224 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 RPA3P35244 121 aaPredicted RBP4.01□□□□□ -1.77
LINC00561-201ENST00000565815 EIF2DP41214 584 aaKnown RBP4.01□□□□□ -1.77
LINC00561-201ENST00000565815 MAGEA6P43360 314 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 CAMPP49913 170 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 ZNF81P51508 661 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 ZNF132P52740 706 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 MFAP4P55083 255 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 PPP2R2BQ00005 443 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 PRKCEQ02156 737 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 WASHC5Q12768 1159 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 PDIA2Q13087 525 aaKnown RBP4.01□□□□□ -1.77
LINC00561-201ENST00000565815 PDGFRLQ15198 375 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 LPAL2Q16609 132 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 DUOXA1Q1HG43 343 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 ITPRIPL2Q3MIP1 535 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 PMS2CLQ68D20 193 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 OR52E8Q6IFG1 317 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 ZNF449Q6P9G9 518 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 FAM47EQ6ZV65 393 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 SHFQ7M4L6 423 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 CAMK1DQ8IU85 385 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 CBWD2Q8IUF1 395 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 ST13P4Q8IZP2 240 aaPredicted RBP4.01□□□□□ -1.77
LINC00561-201ENST00000565815 AADATQ8N5Z0 425 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 ITFG1Q8TB96 612 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 TAS1R2Q8TE23 839 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 SLC44A1Q8WWI5 657 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 POMGNT1Q8WZA1 660 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 PPP1R14BQ96C90 147 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 PAIP2Q9BPZ3 127 aaKnown RBP4.01□□□□□ -1.77
LINC00561-201ENST00000565815 RPP25Q9BUL9 199 aaKnown RBP4.01□□□□□ -1.77
LINC00561-201ENST00000565815 SEMA4CQ9C0C4 833 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 MRGBPQ9NV56 204 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms