RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 COL21A1Q96P44 957 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 CCDC32Q9BV29 185 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 SLC12A9Q9BXP2 914 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 ZBTB20Q9HC78 741 aaPredicted RBP10.05□□□□□ -0.8
RNF40-204ENST00000563683 HEBP1Q9NRV9 189 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.05□□□□□ -0.8
RNF40-204ENST00000563683 UGT2B17O75795 530 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 CCNB2O95067 398 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 VIPP01282 170 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 JUPP14923 745 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 NOS3P29474 1203 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 DDOSTP39656 456 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 HTR3AP46098 478 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 CLCNKAP51800 687 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 CCDC58Q4VC31 144 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 PRAMEF14Q5SWL7 426 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 PDZK1Q5T2W1 519 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 PRAMEF13Q5VWM6 474 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 SIGIRRQ6IA17 410 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 TSPYL5Q86VY4 417 aaPredicted RBP10.05□□□□□ -0.8
RNF40-204ENST00000563683 OOSP2Q86WS3 158 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 RNF130Q86XS8 419 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 UBQLNLQ8IYU4 475 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 C12orf76Q8N812 135 aaPredicted RBP10.05□□□□□ -0.8
RNF40-204ENST00000563683 HUS1BQ8NHY5 278 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 ANGPTL6Q8NI99 470 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 USP7Q93009 1102 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 C12orf66Q96MD2 445 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 TRIB3Q96RU7 358 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 ZCCHC3Q9NUD5 404 aaKnown RBP10.05□□□□□ -0.8
RNF40-204ENST00000563683 STMN3Q9NZ72 180 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 TMEFF2Q9UIK5 374 aaPredicted RBP10.05□□□□□ -0.8
RNF40-204ENST00000563683 CLEC4EQ9ULY5 219 aa10.05□□□□□ -0.8
RNF40-204ENST00000563683 CEP290O15078 2479 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 A0A0G2JMZ2 1700 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 LRRC37A2A6NM11 1700 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 C9P02748 559 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 ADH5P11766 374 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 PAICSP22234 425 aaKnown RBP10.04□□□□□ -0.8
RNF40-204ENST00000563683 ACVR1Q04771 509 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 CEACAM20Q6UY09 585 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 RAB43Q86YS6 212 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 ZNF548Q8NEK5 533 aaPredicted RBP10.04□□□□□ -0.8
RNF40-204ENST00000563683 BCL7CQ8WUZ0 217 aaPredicted RBP10.04□□□□□ -0.8
RNF40-204ENST00000563683 FOXJ1Q92949 421 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 ARPC5LQ9BPX5 153 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 CCDC3Q9BQI4 270 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 PDFQ9HBH1 243 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 SPACA6W5XKT8 324 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 TRBC2A0A5B9 178 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 RTCAO00442 366 aaKnown RBP10.04□□□□□ -0.8
RNF40-204ENST00000563683 PDE9AO76083 593 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 GNRH1P01148 92 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 BCHEP06276 602 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 IL1RNP18510 177 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 RPS3P23396 243 aaKnown RBP eCLIP10.04□□□□□ -0.8
RNF40-204ENST00000563683 SLC15A1P46059 708 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 SUOXP51687 545 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 BNC1Q01954 994 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.04□□□□□ -0.8
RNF40-204ENST00000563683 TIGD6Q17RP2 521 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 KIAA1614Q5VZ46 1190 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 CAMKK1Q8N5S9 505 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 SETD6Q8TBK2 473 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 Q96MT0 163 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 CARS2Q9HA77 564 aaKnown RBP10.04□□□□□ -0.8
RNF40-204ENST00000563683 ITM2CQ9NQX7 267 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 DIABLOQ9NR28 239 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 DCAF13Q9NV06 445 aaKnown RBP10.04□□□□□ -0.8
RNF40-204ENST00000563683 INSL6Q9Y581 213 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 GLOD5A6NK44 160 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 SOX14O95416 240 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 YES1P07947 543 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 ETFAP13804 333 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 TGFBR2P37173 567 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 MAPK9P45984 424 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 RPP38P78345 283 aaKnown RBP10.04□□□□□ -0.8
RNF40-204ENST00000563683 ZNF805Q5CZA5 627 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 LIPJQ5W064 366 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 ANKRD34AQ69YU3 496 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 HMGN2P46Q86SG4 172 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 CYP4Z2PQ8N1L4 340 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 SLC39A11Q8N1S5 342 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 CELF2-AS1Q8N7Q2 184 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 TCEAL4Q96EI5 215 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 C1GALT1C1Q96EU7 318 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 NXF2Q9GZY0 626 aaKnown RBP10.04□□□□□ -0.8
RNF40-204ENST00000563683 RPRD1BQ9NQG5 326 aaKnown RBP10.04□□□□□ -0.8
RNF40-204ENST00000563683 ELOVL2Q9NXB9 296 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 TVP23BQ9NYZ1 205 aa10.04□□□□□ -0.8
RNF40-204ENST00000563683 H7BY64 318 aa10.03□□□□□ -0.8
RNF40-204ENST00000563683 CCRL2O00421 344 aa10.03□□□□□ -0.8
RNF40-204ENST00000563683 TFECO14948 347 aaPredicted RBP10.03□□□□□ -0.8
RNF40-204ENST00000563683 FGF19O95750 216 aa10.03□□□□□ -0.8
RNF40-204ENST00000563683 ALPPL2P10696 532 aa10.03□□□□□ -0.8
RNF40-204ENST00000563683 ANXA8P13928 327 aa10.03□□□□□ -0.8
RNF40-204ENST00000563683 AZGP1P25311 298 aaKnown RBP10.03□□□□□ -0.8
RNF40-204ENST00000563683 FCHO2Q0JRZ9 810 aa10.03□□□□□ -0.8
RNF40-204ENST00000563683 TARDBPQ13148 414 aaKnown RBP eCLIP10.03□□□□□ -0.8
RNF40-204ENST00000563683 MRPL58Q14197 206 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms