RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 ERLIN1O75477 346 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 JRKO75564 520 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 SUPT7LO94864 414 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 SCELO95171 688 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 OTCP00480 354 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 IL10P22301 178 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 HPDP32754 393 aaPredicted RBP5.84□□□□□ -1.47
CNOT1-204ENST00000563130 CCR10P46092 362 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 XCR1P46094 333 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 CCNG1P51959 295 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 ARFIP1P53367 373 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 DNAJB13P59910 316 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 SKP1P63208 163 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 CPSF6Q16630 551 aaKnown RBP eCLIP5.84□□□□□ -1.47
CNOT1-204ENST00000563130 KRT71Q3SY84 523 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 TOR1AIP1Q5JTV8 583 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 C10orf62Q5T681 223 aaPredicted RBP5.84□□□□□ -1.47
CNOT1-204ENST00000563130 DEPDC1Q5TB30 811 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 LETMD1Q6P1Q0 360 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 TMEM205Q6UW68 189 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 KIRREL2Q6UWL6 708 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 LRIG3Q6UXM1 1119 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 SHISA6Q6ZSJ9 500 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 UBE3DQ7Z6J8 389 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 SRRM1Q8IYB3 904 aaKnown RBP5.84□□□□□ -1.47
CNOT1-204ENST00000563130 EXD3Q8N9H8 876 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 TMEM102Q8N9M5 508 aaPredicted RBP5.84□□□□□ -1.47
CNOT1-204ENST00000563130 OR4F6Q8NGB9 312 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 APOBEC4Q8WW27 367 aaKnown RBP5.84□□□□□ -1.47
CNOT1-204ENST00000563130 OR1F2PQ96R84 312 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 F2RL3Q96RI0 385 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 MESP1Q9BRJ9 268 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 CRB3Q9BUF7 120 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 GSTO2Q9H4Y5 243 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 DMRT3Q9NQL9 472 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 LANCL2Q9NS86 450 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 OXSMQ9NWU1 459 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 P4HTMQ9NXG6 502 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 SENP1Q9P0U3 644 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 MAN2B2Q9Y2E5 1009 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 LOC102723996A0A087X1L8 192 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 ZNF860A6NHJ4 632 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 MAGEB17A8MXT2 336 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 AGPSO00116 658 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 PCDH17O14917 1159 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 CHST10O43529 356 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 PRMT3O60678 531 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 CEACAM4O75871 244 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 IGHEP01854 428 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 FAM157BP0CG42 384 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 MYL2P10916 166 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 CPA3P15088 417 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 ETV4P43268 484 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 TSFMP43897 325 aaKnown RBP5.83□□□□□ -1.48
CNOT1-204ENST00000563130 POLE2P56282 527 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 SOX8P57073 446 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 NAA20P61599 178 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 CUL3Q13618 768 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 ATP1A4Q13733 1029 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 RUNX2Q13950 521 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 PCLAFQ15004 111 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 ZRSR2Q15696 482 aaKnown RBP5.83□□□□□ -1.48
CNOT1-204ENST00000563130 TMEM35AQ53FP2 167 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 SOWAHCQ53LP3 525 aaPredicted RBP5.83□□□□□ -1.48
CNOT1-204ENST00000563130 CEP85LQ5SZL2 805 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 KHDRBS2Q5VWX1 349 aaKnown RBP5.83□□□□□ -1.48
CNOT1-204ENST00000563130 FRG2Q64ET8 278 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 TRIM40Q6P9F5 258 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 MILR1Q7Z6M3 343 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 CROCCP2Q86T23 111 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 EXOC3L1Q86VI1 746 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 MYLK4Q86YV6 388 aaPredicted RBP5.83□□□□□ -1.48
CNOT1-204ENST00000563130 CA13Q8N1Q1 262 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 RNF175Q8N4F7 328 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 SRFBP1Q8NEF9 429 aaKnown RBP5.83□□□□□ -1.48
CNOT1-204ENST00000563130 MYRIPQ8NFW9 859 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 OR11G2Q8NGC1 345 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 TCP10LQ8TDR4 215 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 TRPC4APQ8TEL6 797 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 CCT6BQ92526 530 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 ATP6V1E2Q96A05 226 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 TBC1D20Q96BZ9 403 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 REPS1Q96D71 796 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 CMTM7Q96FZ5 175 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 PGM2Q96G03 612 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 ABHD17AQ96GS6 310 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 MAGEB10Q96LZ2 347 aaPredicted RBP5.83□□□□□ -1.48
CNOT1-204ENST00000563130 KCNC2Q96PR1 638 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 FRG2BQ96QU4 278 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 ZNF382Q96SR6 550 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 MTERF1Q99551 399 aaKnown RBP5.83□□□□□ -1.48
CNOT1-204ENST00000563130 NPLQ9BXD5 320 aaPredicted RBP5.83□□□□□ -1.48
CNOT1-204ENST00000563130 ZNF717Q9BY31 904 aaPredicted RBP5.83□□□□□ -1.48
CNOT1-204ENST00000563130 TRIM55Q9BYV6 548 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 VN1R1Q9GZP7 353 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 ING2Q9H160 280 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 ADNPQ9H2P0 1102 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 MLXIPLQ9NP71 852 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 SSU72Q9NP77 194 aaKnown RBP5.83□□□□□ -1.48
CNOT1-204ENST00000563130 ACSS2Q9NR19 701 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms